Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A1P20908 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.23□□□□□ -1.41
COL5A1P20908 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A1P20908 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A1P20908 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.22□□□□□ -1.41
COL5A1P20908 RN7SKP121-201ENST00000410842 305 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.22□□□□□ -1.41
COL5A1P20908 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A1P20908 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.22□□□□□ -1.41
COL5A1P20908 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.22□□□□□ -1.41
COL5A1P20908 AC083906.1-201ENST00000509298 406 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 RPL7L1P4-201ENST00000513004 707 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 AP006245.2-201ENST00000522004 300 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.22□□□□□ -1.41
COL5A1P20908 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.22□□□□□ -1.41
COL5A1P20908 AC068768.2-201ENST00000602352 343 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.22□□□□□ -1.41
COL5A1P20908 AL354718.1-201ENST00000619764 589 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 MIR6719-201ENST00000622428 87 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A1P20908 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A1P20908 LRRC37A17P-201ENST00000570311 4693 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 MTCO1P25-201ENST00000414449 1799 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 AC093278.2-201ENST00000564956 2485 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A1P20908 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A1P20908 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC6.22□□□□□ -1.41
COL5A1P20908 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A1P20908 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A1P20908 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A1P20908 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A1P20908 AC119674.1-204ENST00000641348 1343 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A1P20908 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A1P20908 RNA5SP510-201ENST00000364697 99 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 MIR541-201ENST00000401360 84 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.22□□□□□ -1.41
COL5A1P20908 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.22□□□□□ -1.41
COL5A1P20908 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.22□□□□□ -1.41
COL5A1P20908 PPIAP7-201ENST00000454070 489 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 RN7SL629P-201ENST00000489622 285 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 SNORD46.2-201ENST00000516021 102 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.22□□□□□ -1.41
COL5A1P20908 AP000620.1-201ENST00000527147 504 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.22□□□□□ -1.41
COL5A1P20908 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.22□□□□□ -1.41
COL5A1P20908 MRPS21P8-201ENST00000569196 235 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.22□□□□□ -1.41
COL5A1P20908 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A1P20908 BUB1P1-201ENST00000603541 607 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 AL157899.1-201ENST00000604110 936 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 AL591167.1-201ENST00000607321 456 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 AC022467.1-201ENST00000614738 749 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.22□□□□□ -1.41
COL5A1P20908 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A1P20908 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
COL5A1P20908 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.22□□□□□ -1.41
COL5A1P20908 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
COL5A1P20908 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A1P20908 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL5A1P20908 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.22□□□□□ -1.41
COL5A1P20908 AC091305.2-201ENST00000624049 1576 ntBASIC6.22□□□□□ -1.41
COL5A1P20908 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
COL5A1P20908 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.21□□□□□ -1.41
COL5A1P20908 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL5A1P20908 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC6.21□□□□□ -1.41
COL5A1P20908 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL5A1P20908 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.21□□□□□ -1.41
COL5A1P20908 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL5A1P20908 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.21□□□□□ -1.42
COL5A1P20908 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL5A1P20908 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
COL5A1P20908 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL5A1P20908 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
COL5A1P20908 RNA5SP273-201ENST00000362484 113 ntBASIC6.21□□□□□ -1.42
COL5A1P20908 SNORA58B-201ENST00000364259 136 ntBASIC6.21□□□□□ -1.42
COL5A1P20908 AL157702.1-201ENST00000398764 426 ntBASIC6.21□□□□□ -1.42
COL5A1P20908 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.21□□□□□ -1.42
COL5A1P20908 NIPA2P1-201ENST00000426223 976 ntBASIC6.21□□□□□ -1.42
COL5A1P20908 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.21□□□□□ -1.42
COL5A1P20908 RN7SL705P-201ENST00000481678 294 ntBASIC6.21□□□□□ -1.42
COL5A1P20908 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL5A1P20908 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.21□□□□□ -1.42
COL5A1P20908 RNA5SP340-201ENST00000517132 107 ntBASIC6.21□□□□□ -1.42
COL5A1P20908 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.21□□□□□ -1.42
COL5A1P20908 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.21□□□□□ -1.42
COL5A1P20908 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
COL5A1P20908 AC129778.1-202ENST00000623812 261 ntBASIC6.21□□□□□ -1.42
COL5A1P20908 AL591379.1-207ENST00000635982 261 ntBASIC6.21□□□□□ -1.42
COL5A1P20908 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.21□□□□□ -1.42
COL5A1P20908 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL5A1P20908 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL5A1P20908 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL5A1P20908 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
COL5A1P20908 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC6.21□□□□□ -1.42
COL5A1P20908 AC011455.2-201ENST00000599320 3336 ntBASIC6.21□□□□□ -1.42
COL5A1P20908 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.21□□□□□ -1.42
COL5A1P20908 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms