Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
HMGB1P09429 AL606537.1-201ENST00000607258 2011 ntBASIC8.24□□□□□ -1.09
HMGB1P09429 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
HMGB1P09429 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HMGB1P09429 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC8.23□□□□□ -1.09
HMGB1P09429 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
HMGB1P09429 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
HMGB1P09429 EEF1A1P16-201ENST00000325349 1414 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
HMGB1P09429 UGT2B26P-201ENST00000508672 1613 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
HMGB1P09429 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HMGB1P09429 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
HMGB1P09429 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
HMGB1P09429 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
HMGB1P09429 AL589655.1-201ENST00000405398 482 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 SOD1P1-201ENST00000407803 440 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 RN7SKP148-201ENST00000410179 275 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 OR51A6P-201ENST00000418680 1004 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 NENFP1-201ENST00000419476 466 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 MYB-206ENST00000420123 1051 ntTSL 5 BASIC8.23□□□□□ -1.09
HMGB1P09429 GRPEL2P2-201ENST00000421856 670 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 AC022022.1-201ENST00000430304 178 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 AC093166.3-201ENST00000448785 303 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC8.23□□□□□ -1.09
HMGB1P09429 SRP68P2-201ENST00000456184 254 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 AP000805.1-201ENST00000471604 784 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC8.23□□□□□ -1.09
HMGB1P09429 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC8.23□□□□□ -1.09
HMGB1P09429 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
HMGB1P09429 BTG4P1-201ENST00000510421 183 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 FABP5P6-201ENST00000510588 409 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 RN7SKP242-201ENST00000515967 289 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC8.23□□□□□ -1.09
HMGB1P09429 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC8.23□□□□□ -1.09
HMGB1P09429 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC8.23□□□□□ -1.09
HMGB1P09429 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC8.23□□□□□ -1.09
HMGB1P09429 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC8.23□□□□□ -1.09
HMGB1P09429 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC8.23□□□□□ -1.09
HMGB1P09429 RN7SL697P-201ENST00000582484 299 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
HMGB1P09429 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
HMGB1P09429 MTCO2P22-201ENST00000603246 681 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 AC091768.1-201ENST00000609258 930 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC8.23□□□□□ -1.09
HMGB1P09429 MIR6731-201ENST00000614863 72 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
HMGB1P09429 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC8.23□□□□□ -1.09
HMGB1P09429 MIR6737-201ENST00000617385 70 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC8.23□□□□□ -1.09
HMGB1P09429 DLST-216ENST00000626051 252 ntTSL 5 BASIC8.23□□□□□ -1.09
HMGB1P09429 AC026108.1-201ENST00000635444 547 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC8.23□□□□□ -1.09
HMGB1P09429 AC079949.2-201ENST00000617117 2933 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HMGB1P09429 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HMGB1P09429 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HMGB1P09429 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HMGB1P09429 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC8.23□□□□□ -1.09
HMGB1P09429 AC022507.1-201ENST00000548349 1505 ntBASIC8.23□□□□□ -1.09
HMGB1P09429 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC8.23□□□□□ -1.09
HMGB1P09429 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HMGB1P09429 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HMGB1P09429 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
HMGB1P09429 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HMGB1P09429 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HMGB1P09429 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC8.22□□□□□ -1.09
HMGB1P09429 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.22□□□□□ -1.09
HMGB1P09429 AC133552.3-201ENST00000572236 1869 ntBASIC8.22□□□□□ -1.09
HMGB1P09429 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HMGB1P09429 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
HMGB1P09429 MT-TP-201ENST00000387461 68 ntBASIC8.22□□□□□ -1.09
HMGB1P09429 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
HMGB1P09429 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
HMGB1P09429 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC8.22□□□□□ -1.09
HMGB1P09429 MGAT2P2-201ENST00000427194 797 ntBASIC8.22□□□□□ -1.09
HMGB1P09429 RPL23AP4-201ENST00000427757 463 ntBASIC8.22□□□□□ -1.09
HMGB1P09429 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC8.22□□□□□ -1.09
HMGB1P09429 AC007563.3-201ENST00000433233 371 ntBASIC8.22□□□□□ -1.09
HMGB1P09429 OSTCP2-201ENST00000437956 444 ntBASIC8.22□□□□□ -1.09
HMGB1P09429 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC8.22□□□□□ -1.09
HMGB1P09429 AL354714.5-201ENST00000450131 590 ntBASIC8.22□□□□□ -1.09
HMGB1P09429 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC8.22□□□□□ -1.09
HMGB1P09429 AC079080.1-201ENST00000479841 822 ntBASIC8.22□□□□□ -1.09
HMGB1P09429 AC021220.1-201ENST00000507445 630 ntBASIC8.22□□□□□ -1.09
HMGB1P09429 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC8.22□□□□□ -1.09
HMGB1P09429 MTHFD2P4-201ENST00000515074 1025 ntBASIC8.22□□□□□ -1.09
HMGB1P09429 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC8.22□□□□□ -1.09
HMGB1P09429 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC8.22□□□□□ -1.09
HMGB1P09429 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC8.22□□□□□ -1.09
HMGB1P09429 AC084373.1-201ENST00000603311 235 ntBASIC8.22□□□□□ -1.09
HMGB1P09429 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC8.22□□□□□ -1.09
HMGB1P09429 AL136097.3-201ENST00000611097 505 ntBASIC8.22□□□□□ -1.09
HMGB1P09429 AP005212.3-201ENST00000619964 528 ntBASIC8.22□□□□□ -1.09
HMGB1P09429 ZNF710-AS1-202ENST00000620791 2133 ntBASIC8.22□□□□□ -1.09
HMGB1P09429 OR5AC4P-202ENST00000642086 985 ntBASIC8.22□□□□□ -1.09
HMGB1P09429 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
HMGB1P09429 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HMGB1P09429 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
HMGB1P09429 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms