Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 LGALS8-202ENST00000323938 1855 ntTSL 5 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 PABPC4L-201ENST00000421491 4944 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 AC245060.6-201ENST00000624350 8420 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 Y_RNA.560-201ENST00000384689 102 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 RN7SKP33-201ENST00000410942 340 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 IGKV1OR2-3-201ENST00000411475 288 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 AC004986.1-201ENST00000414855 607 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 SATB1-AS1-202ENST00000425799 611 ntTSL 5 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 VN1R35P-201ENST00000428102 693 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 AL136231.1-201ENST00000429407 730 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 TRIM60P3Y-201ENST00000432201 673 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 OR5M13P-201ENST00000433944 937 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 RPL14P5-201ENST00000436474 730 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 AC064862.5-201ENST00000440618 334 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 CCNJP1-201ENST00000450600 1149 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 AL390026.1-201ENST00000456647 457 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 AP002371.1-201ENST00000463604 433 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 ALG13-211ENST00000473389 693 ntTSL 2 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 PDCL3P4-201ENST00000489621 720 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 AL135933.1-201ENST00000498657 802 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 AC117522.3-201ENST00000507974 584 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 HNRNPCP1-201ENST00000556181 766 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 TPRKBP2-201ENST00000565969 475 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 AC138207.8-204ENST00000579588 527 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 RN7SL32P-201ENST00000580514 281 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 FAM60CP-201ENST00000591086 664 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 EIF1-207ENST00000591776 797 ntTSL 4 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 ANKRD20A19P-203ENST00000602724 295 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 IGKV1OR2-9-201ENST00000603957 287 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 IGKV1OR2-11-201ENST00000604120 287 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 AC004223.4-201ENST00000612426 332 ntBASIC8.9□□□□□ -0.98
ALDH1A1P00352 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 CORIN-208ENST00000508498 3200 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
ALDH1A1P00352 AL449403.2-201ENST00000624497 2662 ntTSL 2 BASIC8.9□□□□□ -0.98
ALDH1A1P00352 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
ALDH1A1P00352 KIAA1217-208ENST00000396446 3059 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
ALDH1A1P00352 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
ALDH1A1P00352 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
ALDH1A1P00352 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC8.9□□□□□ -0.99
ALDH1A1P00352 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.99
ALDH1A1P00352 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC8.9□□□□□ -0.99
ALDH1A1P00352 RNF19BPY-201ENST00000458209 1550 ntBASIC8.9□□□□□ -0.99
ALDH1A1P00352 AC006299.1-203ENST00000499625 2029 ntTSL 5 BASIC8.9□□□□□ -0.99
ALDH1A1P00352 Z97200.1-201ENST00000606154 2045 ntBASIC8.9□□□□□ -0.99
ALDH1A1P00352 MAPK10-333ENST00000641607 2481 ntBASIC8.9□□□□□ -0.99
ALDH1A1P00352 ZMIZ1-AS1-201ENST00000428862 2851 ntTSL 5 BASIC8.9□□□□□ -0.99
ALDH1A1P00352 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
ALDH1A1P00352 CXCR6-201ENST00000304552 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
ALDH1A1P00352 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC8.9□□□□□ -0.99
ALDH1A1P00352 LACTB2-AS1-201ENST00000499227 3716 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
ALDH1A1P00352 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ALDH1A1P00352 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALDH1A1P00352 AL139020.1-203ENST00000556386 2738 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ALDH1A1P00352 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ALDH1A1P00352 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALDH1A1P00352 MAPK10-202ENST00000359221 2668 ntTSL 5 BASIC8.89□□□□□ -0.99
ALDH1A1P00352 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC8.89□□□□□ -0.99
ALDH1A1P00352 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALDH1A1P00352 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC8.89□□□□□ -0.99
ALDH1A1P00352 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
ALDH1A1P00352 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC8.89□□□□□ -0.99
ALDH1A1P00352 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALDH1A1P00352 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC8.89□□□□□ -0.99
ALDH1A1P00352 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALDH1A1P00352 SLC36A3-201ENST00000335230 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALDH1A1P00352 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ALDH1A1P00352 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ALDH1A1P00352 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALDH1A1P00352 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALDH1A1P00352 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALDH1A1P00352 AC008033.1-201ENST00000216407 1162 ntBASIC8.89□□□□□ -0.99
ALDH1A1P00352 SCGB2A2-201ENST00000227918 505 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALDH1A1P00352 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
ALDH1A1P00352 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALDH1A1P00352 RNY4P24-201ENST00000362735 96 ntBASIC8.89□□□□□ -0.99
ALDH1A1P00352 MIR421-201ENST00000365696 85 ntBASIC8.89□□□□□ -0.99
ALDH1A1P00352 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
ALDH1A1P00352 AL139806.1-201ENST00000403057 1002 ntBASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms