Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 PSMC1P4-201ENST00000515236 1327 ntBASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 AC083806.2-201ENST00000617795 2685 ntBASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 SNORA64.3-201ENST00000365647 134 ntBASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 AC092106.2-201ENST00000436597 487 ntBASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 AC133965.1-201ENST00000452984 354 ntBASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 AC093664.1-201ENST00000511779 289 ntBASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 AC122713.1-201ENST00000518368 1015 ntBASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 AL591767.3-201ENST00000554632 525 ntBASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 AC093278.2-201ENST00000564956 2485 ntBASIC7.85□□□□□ -1.15
CLIP2Q9UDT6 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 PSMC1P6-201ENST00000477233 1319 ntBASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 AC099535.1-201ENST00000408928 371 ntBASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 OR6R1P-201ENST00000431838 940 ntBASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 AC234771.2-201ENST00000445718 597 ntBASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 AC063943.2-201ENST00000495697 534 ntBASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 AC011352.2-201ENST00000514574 1016 ntBASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 SNORA70D-201ENST00000578836 135 ntBASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 AC245052.7-201ENST00000601161 359 ntBASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 NDUFB9P1-201ENST00000604683 510 ntBASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 SNORD96A-201ENST00000606577 79 ntBASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 TEX41-255ENST00000626404 610 ntTSL 5 BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.84□□□□□ -1.15
CLIP2Q9UDT6 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
CLIP2Q9UDT6 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.16
CLIP2Q9UDT6 BRD7P1-201ENST00000557705 1915 ntBASIC7.84□□□□□ -1.16
CLIP2Q9UDT6 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CLIP2Q9UDT6 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
CLIP2Q9UDT6 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CLIP2Q9UDT6 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.83□□□□□ -1.16
CLIP2Q9UDT6 AL669831.5-218ENST00000591702 1873 ntBASIC7.83□□□□□ -1.16
CLIP2Q9UDT6 AC079949.2-201ENST00000617117 2933 ntBASIC7.83□□□□□ -1.16
CLIP2Q9UDT6 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CLIP2Q9UDT6 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.83□□□□□ -1.16
CLIP2Q9UDT6 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CLIP2Q9UDT6 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CLIP2Q9UDT6 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CLIP2Q9UDT6 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CLIP2Q9UDT6 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CLIP2Q9UDT6 AL391261.1-201ENST00000555712 1479 ntBASIC7.83□□□□□ -1.16
CLIP2Q9UDT6 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.83□□□□□ -1.16
CLIP2Q9UDT6 AP000641.1-201ENST00000531988 1639 ntBASIC7.83□□□□□ -1.16
CLIP2Q9UDT6 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
CLIP2Q9UDT6 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.83□□□□□ -1.16
CLIP2Q9UDT6 RNA5SP65-201ENST00000363166 119 ntBASIC7.83□□□□□ -1.16
CLIP2Q9UDT6 SNORA38B-201ENST00000363524 131 ntBASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms