Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL031651.1-201ENST00000615357 1438 ntBASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 MAPK10-261ENST00000641050 3109 ntBASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 ST7-203ENST00000393443 2360 ntTSL 2 BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 AL589826.1-201ENST00000340697 249 ntBASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 TRAV35-201ENST00000390462 330 ntBASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 RPL9P21-201ENST00000392269 505 ntBASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 RPS21P8-201ENST00000413365 247 ntBASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 RPL3P11-201ENST00000434028 1146 ntBASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 NPM1P48-201ENST00000436002 853 ntBASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 RAD1P2-201ENST00000446414 663 ntBASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 RN7SL390P-201ENST00000470634 284 ntBASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 RN7SL350P-201ENST00000492591 299 ntBASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 MRPL57P6-201ENST00000506570 309 ntBASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 AC007537.1-201ENST00000539347 327 ntBASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 AC133552.4-201ENST00000576103 676 ntBASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 RN7SL66P-201ENST00000582099 264 ntBASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 AC067942.1-201ENST00000488045 1493 ntBASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CHMP4CQ96CF2 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 AP005139.1-201ENST00000580702 1647 ntBASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 RNA5SP65-201ENST00000363166 119 ntBASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 PPIAP26-201ENST00000377951 522 ntBASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 AL713922.1-201ENST00000416477 747 ntBASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 AC000089.1-201ENST00000424559 801 ntBASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 RSL24D1P8-201ENST00000434442 492 ntBASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 XKRYP6-201ENST00000440468 1116 ntBASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 XKRYP3-201ENST00000442113 1116 ntBASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 AL845321.1-201ENST00000444603 348 ntBASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 RN7SL372P-201ENST00000461982 298 ntBASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 RN7SKP98-201ENST00000517070 156 ntBASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 IGLC4-201ENST00000517690 248 ntBASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 AP002981.1-201ENST00000517692 975 ntBASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 NXPE2P1-201ENST00000543705 726 ntBASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 ARGFXP2-201ENST00000579304 949 ntBASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 PRELID3BP3-201ENST00000584963 545 ntBASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 IGKV2OR2-7-201ENST00000604652 304 ntBASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 MIR6885-201ENST00000612241 66 ntBASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 Six3os1_4.1-201ENST00000615706 324 ntBASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 MRPL57P3-201ENST00000619218 176 ntBASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
CHMP4CQ96CF2 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC8.1□□□□□ -1.11
CHMP4CQ96CF2 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CHMP4CQ96CF2 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
CHMP4CQ96CF2 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CHMP4CQ96CF2 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC8.1□□□□□ -1.11
CHMP4CQ96CF2 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms