Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 AC015802.5-201ENST00000607478 399 ntBASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 AC020763.5-201ENST00000623298 430 ntBASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 AC073592.6-201ENST00000624271 415 ntBASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 AL121936.2-201ENST00000641935 662 ntBASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 MRPS17P1-201ENST00000596009 3130 ntBASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC187A0A096LP49 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 CD86-209ENST00000493101 1572 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 Y_RNA.110-201ENST00000363220 99 ntBASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 AC007064.3-201ENST00000422608 359 ntBASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 GPN3P1-201ENST00000423883 535 ntBASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 GAPDHP57-201ENST00000424400 585 ntBASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 RPSAP40-201ENST00000442343 891 ntBASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 AL356390.1-201ENST00000455684 397 ntBASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 MTND3P3-201ENST00000505004 126 ntBASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 SNORA26.10-201ENST00000516427 141 ntBASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 SNRPCP6-201ENST00000528310 210 ntBASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 OR4A1P-201ENST00000532342 920 ntBASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 TOMM20P1-201ENST00000534518 427 ntBASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 AC007068.2-201ENST00000543168 395 ntBASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 DPPA3P2-201ENST00000553589 478 ntBASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 MTND4LP25-201ENST00000570218 163 ntBASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 AC008833.1-201ENST00000611633 691 ntBASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 MIR7854-201ENST00000620068 65 ntBASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 AC130456.6-201ENST00000623745 765 ntBASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC187A0A096LP49 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 MAPK10-357ENST00000641831 2858 ntBASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC187A0A096LP49 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms