Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC122714.1-201ENST00000502510 459 ntBASIC6.82□□□□□ -1.32
PCDH9Q9HC56 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 AC093878.1-201ENST00000515630 432 ntBASIC6.82□□□□□ -1.32
PCDH9Q9HC56 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 SNRPCP6-201ENST00000528310 210 ntBASIC6.82□□□□□ -1.32
PCDH9Q9HC56 SETP17-201ENST00000534163 817 ntBASIC6.82□□□□□ -1.32
PCDH9Q9HC56 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 AC091304.4-201ENST00000565703 620 ntBASIC6.82□□□□□ -1.32
PCDH9Q9HC56 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 RN7SL32P-201ENST00000580514 281 ntBASIC6.82□□□□□ -1.32
PCDH9Q9HC56 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 DIMT1P1-201ENST00000603970 763 ntBASIC6.82□□□□□ -1.32
PCDH9Q9HC56 AL356986.1-201ENST00000604085 341 ntBASIC6.82□□□□□ -1.32
PCDH9Q9HC56 AL137000.1-201ENST00000610528 1244 ntBASIC6.82□□□□□ -1.32
PCDH9Q9HC56 PTCHD3P1-201ENST00000612350 537 ntBASIC6.82□□□□□ -1.32
PCDH9Q9HC56 MIR6070-201ENST00000613967 103 ntBASIC6.82□□□□□ -1.32
PCDH9Q9HC56 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC6.82□□□□□ -1.32
PCDH9Q9HC56 AC006328.2-201ENST00000623198 397 ntBASIC6.82□□□□□ -1.32
PCDH9Q9HC56 AC012005.2-201ENST00000624333 397 ntBASIC6.82□□□□□ -1.32
PCDH9Q9HC56 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 AC006213.6-201ENST00000623722 4179 ntBASIC6.82□□□□□ -1.32
PCDH9Q9HC56 OLMALINC-203ENST00000641087 3779 ntBASIC6.82□□□□□ -1.32
PCDH9Q9HC56 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 AC023632.6-201ENST00000624338 2177 ntBASIC6.82□□□□□ -1.32
PCDH9Q9HC56 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH9Q9HC56 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 AC078880.4-201ENST00000617627 1749 ntBASIC6.81□□□□□ -1.32
PCDH9Q9HC56 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 UBBP1-201ENST00000392399 473 ntBASIC6.81□□□□□ -1.32
PCDH9Q9HC56 AL050335.1-201ENST00000396909 869 ntBASIC6.81□□□□□ -1.32
PCDH9Q9HC56 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 CYCSP52-201ENST00000422857 310 ntBASIC6.81□□□□□ -1.32
PCDH9Q9HC56 AHCYP8-201ENST00000425108 209 ntBASIC6.81□□□□□ -1.32
PCDH9Q9HC56 BMS1P11-201ENST00000442351 885 ntBASIC6.81□□□□□ -1.32
PCDH9Q9HC56 PFN1P11-201ENST00000445829 389 ntBASIC6.81□□□□□ -1.32
PCDH9Q9HC56 RBMY2BP-202ENST00000451071 1156 ntBASIC6.81□□□□□ -1.32
PCDH9Q9HC56 BMS1P9-201ENST00000457640 885 ntBASIC6.81□□□□□ -1.32
PCDH9Q9HC56 SEPT14P1-201ENST00000458703 648 ntBASIC6.81□□□□□ -1.32
PCDH9Q9HC56 RN7SL372P-201ENST00000461982 298 ntBASIC6.81□□□□□ -1.32
PCDH9Q9HC56 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 RPL7AP23-201ENST00000482625 776 ntBASIC6.81□□□□□ -1.32
PCDH9Q9HC56 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 RPL17P2-201ENST00000491913 451 ntBASIC6.81□□□□□ -1.32
PCDH9Q9HC56 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 OR51A1P-201ENST00000511110 946 ntBASIC6.81□□□□□ -1.32
PCDH9Q9HC56 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 EIF4EP5-201ENST00000528228 640 ntBASIC6.81□□□□□ -1.32
PCDH9Q9HC56 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 AL591222.2-201ENST00000604443 754 ntBASIC6.81□□□□□ -1.32
PCDH9Q9HC56 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 AC074141.1-201ENST00000588129 2995 ntBASIC6.81□□□□□ -1.32
PCDH9Q9HC56 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH9Q9HC56 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.8□□□□□ -1.32
PCDH9Q9HC56 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDH9Q9HC56 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.8□□□□□ -1.32
PCDH9Q9HC56 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.8□□□□□ -1.32
PCDH9Q9HC56 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDH9Q9HC56 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDH9Q9HC56 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PCDH9Q9HC56 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms