Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
NXF3Q9H4D5 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 SMG1P5-202ENST00000529428 4219 ntBASIC7.09□□□□□ -1.27
NXF3Q9H4D5 SMG1P2-201ENST00000566127 4221 ntBASIC7.09□□□□□ -1.27
NXF3Q9H4D5 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 AL596244.1-201ENST00000567068 3779 ntBASIC7.09□□□□□ -1.27
NXF3Q9H4D5 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 MROH3P-201ENST00000435735 2676 ntBASIC7.09□□□□□ -1.27
NXF3Q9H4D5 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.09□□□□□ -1.27
NXF3Q9H4D5 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 RPL31P11-201ENST00000426558 1558 ntBASIC7.09□□□□□ -1.27
NXF3Q9H4D5 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 CXADRP1-201ENST00000398098 1095 ntBASIC7.09□□□□□ -1.27
NXF3Q9H4D5 MIR541-201ENST00000401360 84 ntBASIC7.09□□□□□ -1.27
NXF3Q9H4D5 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 AC002127.1-201ENST00000421305 225 ntBASIC7.09□□□□□ -1.27
NXF3Q9H4D5 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 GAPDHP34-201ENST00000432112 823 ntBASIC7.09□□□□□ -1.27
NXF3Q9H4D5 AC091390.2-201ENST00000432573 374 ntBASIC7.09□□□□□ -1.27
NXF3Q9H4D5 GAPDHP59-201ENST00000435908 267 ntBASIC7.09□□□□□ -1.27
NXF3Q9H4D5 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 AC118758.1-202ENST00000454719 225 ntBASIC7.09□□□□□ -1.27
NXF3Q9H4D5 AC117395.1-201ENST00000487390 403 ntBASIC7.09□□□□□ -1.27
NXF3Q9H4D5 AC113367.2-201ENST00000505749 160 ntBASIC7.09□□□□□ -1.27
NXF3Q9H4D5 AC112484.3-201ENST00000505910 329 ntBASIC7.09□□□□□ -1.27
NXF3Q9H4D5 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 SNORA74.1-201ENST00000516320 180 ntBASIC7.09□□□□□ -1.27
NXF3Q9H4D5 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 AC026898.1-201ENST00000586404 571 ntBASIC7.09□□□□□ -1.27
NXF3Q9H4D5 BUB1P1-201ENST00000603541 607 ntBASIC7.09□□□□□ -1.27
NXF3Q9H4D5 CXADRP3-202ENST00000617265 1100 ntBASIC7.09□□□□□ -1.27
NXF3Q9H4D5 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.09□□□□□ -1.27
NXF3Q9H4D5 AL139384.2-201ENST00000613809 3590 ntBASIC7.09□□□□□ -1.28
NXF3Q9H4D5 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
NXF3Q9H4D5 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
NXF3Q9H4D5 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 MIR621-201ENST00000384919 96 ntBASIC7.08□□□□□ -1.28
NXF3Q9H4D5 RAB5CP1-201ENST00000395972 580 ntBASIC7.08□□□□□ -1.28
NXF3Q9H4D5 RNA5SP198-201ENST00000410376 127 ntBASIC7.08□□□□□ -1.28
NXF3Q9H4D5 AC096537.2-201ENST00000413707 714 ntBASIC7.08□□□□□ -1.28
NXF3Q9H4D5 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 AC068491.1-201ENST00000449539 1241 ntBASIC7.08□□□□□ -1.28
NXF3Q9H4D5 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 RN7SL170P-201ENST00000487098 295 ntBASIC7.08□□□□□ -1.28
NXF3Q9H4D5 GM2AP2-201ENST00000491764 562 ntBASIC7.08□□□□□ -1.28
NXF3Q9H4D5 AC063943.2-201ENST00000495697 534 ntBASIC7.08□□□□□ -1.28
NXF3Q9H4D5 RNA5SP418-201ENST00000515951 117 ntBASIC7.08□□□□□ -1.28
NXF3Q9H4D5 RNA5SP441-201ENST00000516809 88 ntBASIC7.08□□□□□ -1.28
NXF3Q9H4D5 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 OR4A13P-201ENST00000529316 942 ntBASIC7.08□□□□□ -1.28
NXF3Q9H4D5 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.08□□□□□ -1.28
NXF3Q9H4D5 LINC02495-203ENST00000636704 242 ntBASIC7.08□□□□□ -1.28
NXF3Q9H4D5 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 AL136531.3-201ENST00000624378 3658 ntBASIC7.08□□□□□ -1.28
NXF3Q9H4D5 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
NXF3Q9H4D5 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
NXF3Q9H4D5 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
NXF3Q9H4D5 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
NXF3Q9H4D5 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms