Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 ELOCP28-201ENST00000590044 317 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AC126118.1-201ENST00000607744 628 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AC006566.1-201ENST00000608943 513 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AC007204.2-201ENST00000615022 616 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AC010538.1-201ENST00000615131 663 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 MIR6761-201ENST00000617899 72 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AC025162.2-201ENST00000619602 560 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AC079248.2-201ENST00000623779 326 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AC008555.1-201ENST00000561778 2757 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 MAPK10-377ENST00000642006 2752 ntBASIC6.96□□□□□ -1.3
ATG4DQ86TL0 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC6.96□□□□□ -1.3
ATG4DQ86TL0 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 RERE-203ENST00000400907 2973 ntTSL 5 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 BX005019.1-201ENST00000561881 1810 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AL080312.1-201ENST00000256654 824 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AL590084.2-201ENST00000401481 382 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AL603865.2-201ENST00000401679 213 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 BCRP8-201ENST00000412037 255 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AL022100.1-202ENST00000421214 548 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 ARL2BPP3-201ENST00000421226 480 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 PRPS1P2-201ENST00000430496 937 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 PYHIN5P-201ENST00000431627 723 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 SLC25A24P1-202ENST00000434803 1220 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AC231532.1-201ENST00000438584 312 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AL137074.1-201ENST00000442640 465 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 CCRL1P1-201ENST00000449542 1053 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AL390026.1-201ENST00000456647 457 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AC005410.1-202ENST00000460347 485 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 RPL12P40-201ENST00000467028 488 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 RPS2P25-201ENST00000467247 580 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 BZW1P2-201ENST00000473537 826 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 RN7SL335P-201ENST00000482790 304 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 RN7SL314P-201ENST00000490735 292 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AC107956.2-201ENST00000496042 454 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AC114801.1-201ENST00000512633 297 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AC092593.2-201ENST00000513866 913 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 OR7E10P-201ENST00000526420 991 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AC090115.2-201ENST00000548060 883 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AC011270.1-201ENST00000558606 583 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 TMX3-204ENST00000562706 937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AC136619.2-201ENST00000563361 631 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
ATG4DQ86TL0 AL096855.2-201ENST00000605785 369 ntBASIC6.95□□□□□ -1.3
ATG4DQ86TL0 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms