Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 AL121977.1-201ENST00000401636 979 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 RPL31-202ENST00000409000 641 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 AL354766.1-201ENST00000423396 542 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 RPLP0P1-201ENST00000457002 361 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 AL445687.2-201ENST00000458156 728 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 BX323845.2-201ENST00000458382 234 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 RPS20P23-201ENST00000461683 354 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 AC091982.1-202ENST00000473923 343 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 AC079594.1-201ENST00000489757 331 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 RN7SL284P-201ENST00000498823 275 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 RN7SKP11-201ENST00000517018 287 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 OXR1-212ENST00000521592 993 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DMAP28067 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 COX6CP11-201ENST00000555293 229 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 OR4F28P-201ENST00000559128 938 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 UBE2CP4-201ENST00000561405 535 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 AC090651.1-201ENST00000567865 634 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 OR4F8P-201ENST00000589943 937 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 RN7SL126P-201ENST00000616400 299 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 AC002094.5-201ENST00000623773 629 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 AC124944.3-204ENST00000641191 150 ntBASIC5.66□□□□□ -1.5
HLA-DMAP28067 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DMAP28067 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HLA-DMAP28067 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
HLA-DMAP28067 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DMAP28067 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DMAP28067 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DMAP28067 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DMAP28067 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DMAP28067 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DMAP28067 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DMAP28067 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DMAP28067 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DMAP28067 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DMAP28067 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DMAP28067 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DMAP28067 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DMAP28067 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC5.65□□□□□ -1.5
HLA-DMAP28067 RPL7-203ENST00000396466 762 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DMAP28067 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DMAP28067 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DMAP28067 AC009237.9-201ENST00000414800 347 ntBASIC5.65□□□□□ -1.5
HLA-DMAP28067 AL663061.1-201ENST00000416625 580 ntBASIC5.65□□□□□ -1.5
HLA-DMAP28067 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HLA-DMAP28067 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DMAP28067 AC018804.1-201ENST00000430381 618 ntBASIC5.65□□□□□ -1.5
HLA-DMAP28067 AL645936.2-201ENST00000430565 928 ntBASIC5.65□□□□□ -1.5
HLA-DMAP28067 AL365220.1-201ENST00000432923 399 ntBASIC5.65□□□□□ -1.5
HLA-DMAP28067 RPS10P3-201ENST00000439253 494 ntBASIC5.65□□□□□ -1.5
HLA-DMAP28067 AC079922.1-201ENST00000443291 359 ntBASIC5.65□□□□□ -1.5
HLA-DMAP28067 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DMAP28067 AL022237.1-201ENST00000446663 358 ntBASIC5.65□□□□□ -1.5
HLA-DMAP28067 OR7E102P-201ENST00000448855 1015 ntBASIC5.65□□□□□ -1.5
HLA-DMAP28067 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DMAP28067 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC5.65□□□□□ -1.5
HLA-DMAP28067 MEF2AP1-201ENST00000454867 863 ntBASIC5.65□□□□□ -1.5
HLA-DMAP28067 AC008026.1-201ENST00000460492 447 ntBASIC5.65□□□□□ -1.5
HLA-DMAP28067 RN7SL552P-201ENST00000462094 276 ntBASIC5.65□□□□□ -1.5
HLA-DMAP28067 RPL7AP30-201ENST00000482859 796 ntBASIC5.65□□□□□ -1.5
HLA-DMAP28067 RPL23AP80-201ENST00000495605 424 ntBASIC5.65□□□□□ -1.5
HLA-DMAP28067 RN7SL143P-201ENST00000496780 297 ntBASIC5.65□□□□□ -1.5
HLA-DMAP28067 RN7SL519P-201ENST00000497925 288 ntBASIC5.65□□□□□ -1.5
HLA-DMAP28067 AP003041.2-201ENST00000525666 1180 ntBASIC5.65□□□□□ -1.5
HLA-DMAP28067 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HLA-DMAP28067 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC5.65□□□□□ -1.5
HLA-DMAP28067 OR4H6P-201ENST00000563771 921 ntBASIC5.65□□□□□ -1.5
HLA-DMAP28067 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DMAP28067 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.65□□□□□ -1.5
HLA-DMAP28067 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.65□□□□□ -1.5
HLA-DMAP28067 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC5.65□□□□□ -1.5
HLA-DMAP28067 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.65□□□□□ -1.5
HLA-DMAP28067 AL139123.1-201ENST00000612008 430 ntBASIC5.65□□□□□ -1.5
HLA-DMAP28067 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.65□□□□□ -1.5
HLA-DMAP28067 AC135068.11-201ENST00000636378 921 ntBASIC5.65□□□□□ -1.5
HLA-DMAP28067 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms