Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX4O60224 AC009120.2-204ENST00000621548 2032 ntBASIC6.13□□□□□ -1.43
SSX4O60224 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.13□□□□□ -1.43
SSX4O60224 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SSX4O60224 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SSX4O60224 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SSX4O60224 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SSX4O60224 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX4O60224 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SSX4O60224 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SSX4O60224 RN7SKP118-201ENST00000364331 330 ntBASIC6.13□□□□□ -1.43
SSX4O60224 AC006511.2-201ENST00000388966 660 ntBASIC6.13□□□□□ -1.43
SSX4O60224 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SSX4O60224 AC091492.1-201ENST00000419844 272 ntBASIC6.13□□□□□ -1.43
SSX4O60224 AL672212.1-201ENST00000422246 400 ntBASIC6.13□□□□□ -1.43
SSX4O60224 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX4O60224 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX4O60224 AL589794.1-201ENST00000424971 390 ntBASIC6.13□□□□□ -1.43
SSX4O60224 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
SSX4O60224 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.13□□□□□ -1.43
SSX4O60224 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX4O60224 BX119904.3-201ENST00000428194 957 ntBASIC6.13□□□□□ -1.43
SSX4O60224 RPL21P33-201ENST00000444831 484 ntBASIC6.13□□□□□ -1.43
SSX4O60224 FCF1P7-201ENST00000451185 558 ntBASIC6.13□□□□□ -1.43
SSX4O60224 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
SSX4O60224 YRDCP3-201ENST00000456507 480 ntBASIC6.13□□□□□ -1.43
SSX4O60224 AC126615.1-201ENST00000470084 630 ntBASIC6.13□□□□□ -1.43
SSX4O60224 AC117394.1-201ENST00000477323 567 ntBASIC6.13□□□□□ -1.43
SSX4O60224 AL135933.1-201ENST00000498657 802 ntBASIC6.13□□□□□ -1.43
SSX4O60224 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.13□□□□□ -1.43
SSX4O60224 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.13□□□□□ -1.43
SSX4O60224 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
SSX4O60224 AC025857.1-201ENST00000525252 377 ntBASIC6.13□□□□□ -1.43
SSX4O60224 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SSX4O60224 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.13□□□□□ -1.43
SSX4O60224 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.13□□□□□ -1.43
SSX4O60224 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SSX4O60224 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.13□□□□□ -1.43
SSX4O60224 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.13□□□□□ -1.43
SSX4O60224 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SSX4O60224 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC6.13□□□□□ -1.43
SSX4O60224 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.13□□□□□ -1.43
SSX4O60224 AC010287.1-201ENST00000566916 357 ntBASIC6.13□□□□□ -1.43
SSX4O60224 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SSX4O60224 MIR4470-201ENST00000583453 72 ntBASIC6.13□□□□□ -1.43
SSX4O60224 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.13□□□□□ -1.43
SSX4O60224 AC023513.1-201ENST00000604396 691 ntBASIC6.13□□□□□ -1.43
SSX4O60224 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.13□□□□□ -1.43
SSX4O60224 AL352984.2-202ENST00000613699 155 ntBASIC6.13□□□□□ -1.43
SSX4O60224 AC107905.1-201ENST00000616204 426 ntBASIC6.13□□□□□ -1.43
SSX4O60224 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.13□□□□□ -1.43
SSX4O60224 SNX18P10-201ENST00000625014 519 ntBASIC6.13□□□□□ -1.43
SSX4O60224 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC6.13□□□□□ -1.43
SSX4O60224 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX4O60224 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX4O60224 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.13□□□□□ -1.43
SSX4O60224 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX4O60224 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
SSX4O60224 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.13□□□□□ -1.43
SSX4O60224 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
SSX4O60224 AC009220.2-201ENST00000489759 1751 ntBASIC6.13□□□□□ -1.43
SSX4O60224 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SSX4O60224 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX4O60224 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.13□□□□□ -1.43
SSX4O60224 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX4O60224 AC005225.5-201ENST00000623547 2225 ntBASIC6.13□□□□□ -1.43
SSX4O60224 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SSX4O60224 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.12□□□□□ -1.43
SSX4O60224 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSX4O60224 AC027575.3-201ENST00000583058 2747 ntBASIC6.12□□□□□ -1.43
SSX4O60224 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SSX4O60224 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSX4O60224 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.12□□□□□ -1.43
SSX4O60224 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSX4O60224 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
SSX4O60224 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSX4O60224 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSX4O60224 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SSX4O60224 MIR551B-201ENST00000384984 96 ntBASIC6.12□□□□□ -1.43
SSX4O60224 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.12□□□□□ -1.43
SSX4O60224 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.12□□□□□ -1.43
SSX4O60224 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.12□□□□□ -1.43
SSX4O60224 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.12□□□□□ -1.43
SSX4O60224 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SSX4O60224 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.12□□□□□ -1.43
SSX4O60224 AC009237.4-201ENST00000441078 238 ntBASIC6.12□□□□□ -1.43
SSX4O60224 PABPC1P10-201ENST00000464731 381 ntBASIC6.12□□□□□ -1.43
SSX4O60224 RN7SL790P-201ENST00000474043 298 ntBASIC6.12□□□□□ -1.43
SSX4O60224 AL591122.1-201ENST00000487348 492 ntBASIC6.12□□□□□ -1.43
SSX4O60224 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSX4O60224 RPL9P15-201ENST00000491096 532 ntBASIC6.12□□□□□ -1.43
SSX4O60224 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.12□□□□□ -1.43
SSX4O60224 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSX4O60224 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC6.12□□□□□ -1.43
SSX4O60224 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.12□□□□□ -1.43
SSX4O60224 AP001803.1-201ENST00000525668 147 ntBASIC6.12□□□□□ -1.43
SSX4O60224 AP003080.1-202ENST00000526526 915 ntBASIC6.12□□□□□ -1.43
SSX4O60224 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SSX4O60224 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.12□□□□□ -1.43
SSX4O60224 OR9L1P-201ENST00000529493 933 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms