Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC021006.1-201ENST00000489849 553 ntBASIC9.57□□□□□ -0.88
HFM1A2PYH4 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC9.57□□□□□ -0.88
HFM1A2PYH4 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC9.57□□□□□ -0.88
HFM1A2PYH4 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC9.57□□□□□ -0.88
HFM1A2PYH4 TPRX1P1-201ENST00000557620 319 ntBASIC9.57□□□□□ -0.88
HFM1A2PYH4 SMIM12P1-201ENST00000603004 274 ntBASIC9.57□□□□□ -0.88
HFM1A2PYH4 AC012254.5-201ENST00000623573 478 ntBASIC9.57□□□□□ -0.88
HFM1A2PYH4 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC9.57□□□□□ -0.88
HFM1A2PYH4 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
HFM1A2PYH4 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
HFM1A2PYH4 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC9.57□□□□□ -0.88
HFM1A2PYH4 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
HFM1A2PYH4 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
HFM1A2PYH4 SNORD16-201ENST00000362803 99 ntBASIC9.56□□□□□ -0.88
HFM1A2PYH4 FIG4-202ENST00000368941 791 ntTSL 3 BASIC9.56□□□□□ -0.88
HFM1A2PYH4 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC9.56□□□□□ -0.88
HFM1A2PYH4 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC9.56□□□□□ -0.88
HFM1A2PYH4 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC9.56□□□□□ -0.88
HFM1A2PYH4 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC9.56□□□□□ -0.88
HFM1A2PYH4 AC112484.3-201ENST00000505910 329 ntBASIC9.56□□□□□ -0.88
HFM1A2PYH4 IGKV1D-22-201ENST00000518953 324 ntBASIC9.56□□□□□ -0.88
HFM1A2PYH4 AC023968.1-201ENST00000560719 475 ntBASIC9.56□□□□□ -0.88
HFM1A2PYH4 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC9.56□□□□□ -0.88
HFM1A2PYH4 AL445647.2-201ENST00000615170 130 ntBASIC9.56□□□□□ -0.88
HFM1A2PYH4 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC9.56□□□□□ -0.88
HFM1A2PYH4 LPAL2-203ENST00000454031 2498 ntBASIC9.56□□□□□ -0.88
HFM1A2PYH4 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
HFM1A2PYH4 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
HFM1A2PYH4 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
HFM1A2PYH4 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
HFM1A2PYH4 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
HFM1A2PYH4 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
HFM1A2PYH4 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
HFM1A2PYH4 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC9.56□□□□□ -0.88
HFM1A2PYH4 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC9.56□□□□□ -0.88
HFM1A2PYH4 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC9.56□□□□□ -0.88
HFM1A2PYH4 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC9.56□□□□□ -0.88
HFM1A2PYH4 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
HFM1A2PYH4 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
HFM1A2PYH4 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
HFM1A2PYH4 RNA5SP346-201ENST00000363541 121 ntBASIC9.56□□□□□ -0.88
HFM1A2PYH4 RNA5SP279-201ENST00000365513 117 ntBASIC9.56□□□□□ -0.88
HFM1A2PYH4 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
HFM1A2PYH4 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
HFM1A2PYH4 RBBP4P5-201ENST00000398583 1266 ntBASIC9.56□□□□□ -0.88
HFM1A2PYH4 AL139805.1-201ENST00000407837 289 ntBASIC9.56□□□□□ -0.88
HFM1A2PYH4 SNORA11B-201ENST00000408175 129 ntBASIC9.56□□□□□ -0.88
HFM1A2PYH4 AL157884.1-201ENST00000424561 454 ntBASIC9.56□□□□□ -0.88
HFM1A2PYH4 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC9.56□□□□□ -0.88
HFM1A2PYH4 AC026254.2-201ENST00000475295 371 ntBASIC9.56□□□□□ -0.88
HFM1A2PYH4 RPL12P31-201ENST00000478433 450 ntBASIC9.56□□□□□ -0.88
HFM1A2PYH4 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC9.56□□□□□ -0.88
HFM1A2PYH4 RNA5SP441-201ENST00000516809 88 ntBASIC9.56□□□□□ -0.88
HFM1A2PYH4 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC9.56□□□□□ -0.88
HFM1A2PYH4 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC9.56□□□□□ -0.88
HFM1A2PYH4 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC9.56□□□□□ -0.88
HFM1A2PYH4 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
HFM1A2PYH4 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC9.56□□□□□ -0.88
HFM1A2PYH4 GLYATL1P2-202ENST00000588046 902 ntBASIC9.56□□□□□ -0.88
HFM1A2PYH4 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
HFM1A2PYH4 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
HFM1A2PYH4 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
HFM1A2PYH4 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
HFM1A2PYH4 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC9.56□□□□□ -0.88
HFM1A2PYH4 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
HFM1A2PYH4 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
HFM1A2PYH4 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
HFM1A2PYH4 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
HFM1A2PYH4 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
HFM1A2PYH4 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
HFM1A2PYH4 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
HFM1A2PYH4 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
HFM1A2PYH4 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
HFM1A2PYH4 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
HFM1A2PYH4 AL731556.1-201ENST00000394628 3711 ntBASIC9.55□□□□□ -0.88
HFM1A2PYH4 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
HFM1A2PYH4 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
HFM1A2PYH4 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC9.55□□□□□ -0.88
HFM1A2PYH4 MTND2P12-201ENST00000417560 1252 ntBASIC9.55□□□□□ -0.88
HFM1A2PYH4 PSMD10P2-201ENST00000432890 672 ntBASIC9.55□□□□□ -0.88
HFM1A2PYH4 AC007679.3-201ENST00000434035 414 ntBASIC9.55□□□□□ -0.88
HFM1A2PYH4 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
HFM1A2PYH4 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC9.55□□□□□ -0.88
HFM1A2PYH4 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC9.55□□□□□ -0.88
HFM1A2PYH4 AC036111.2-201ENST00000533247 901 ntBASIC9.55□□□□□ -0.88
HFM1A2PYH4 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC9.55□□□□□ -0.88
HFM1A2PYH4 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC9.55□□□□□ -0.88
HFM1A2PYH4 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC9.55□□□□□ -0.88
HFM1A2PYH4 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC9.55□□□□□ -0.88
HFM1A2PYH4 AL589863.1-201ENST00000595383 631 ntBASIC9.55□□□□□ -0.88
HFM1A2PYH4 AL591167.1-201ENST00000607321 456 ntBASIC9.55□□□□□ -0.88
HFM1A2PYH4 AC015982.1-201ENST00000608113 465 ntBASIC9.55□□□□□ -0.88
HFM1A2PYH4 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC9.55□□□□□ -0.88
HFM1A2PYH4 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC9.55□□□□□ -0.88
HFM1A2PYH4 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC9.55□□□□□ -0.88
HFM1A2PYH4 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
HFM1A2PYH4 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
HFM1A2PYH4 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
HFM1A2PYH4 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
HFM1A2PYH4 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC9.54□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms