Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 SETP20-201ENST00000457046 852 ntBASIC8.25□□□□□ -1.09
SCN11AQ9UI33 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 AC115837.1-201ENST00000517662 1001 ntBASIC8.25□□□□□ -1.09
SCN11AQ9UI33 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 AC084337.1-201ENST00000524809 686 ntBASIC8.25□□□□□ -1.09
SCN11AQ9UI33 AC027369.2-201ENST00000528030 440 ntBASIC8.25□□□□□ -1.09
SCN11AQ9UI33 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 AL121579.2-201ENST00000555466 590 ntBASIC8.25□□□□□ -1.09
SCN11AQ9UI33 AC090616.1-201ENST00000583895 447 ntBASIC8.25□□□□□ -1.09
SCN11AQ9UI33 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 AC023245.2-201ENST00000530760 2978 ntBASIC8.25□□□□□ -1.09
SCN11AQ9UI33 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 AC131392.2-201ENST00000505635 4332 ntBASIC8.25□□□□□ -1.09
SCN11AQ9UI33 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 RPS3P2-201ENST00000421346 701 ntBASIC8.25□□□□□ -1.09
SCN11AQ9UI33 AL157884.1-201ENST00000424561 454 ntBASIC8.25□□□□□ -1.09
SCN11AQ9UI33 RPS7P14-201ENST00000426405 583 ntBASIC8.25□□□□□ -1.09
SCN11AQ9UI33 AC016908.1-201ENST00000442571 1219 ntBASIC8.25□□□□□ -1.09
SCN11AQ9UI33 AC092824.1-201ENST00000483524 576 ntBASIC8.25□□□□□ -1.09
SCN11AQ9UI33 AC063943.2-201ENST00000495697 534 ntBASIC8.25□□□□□ -1.09
SCN11AQ9UI33 RBBP4P1-201ENST00000502424 1276 ntBASIC8.25□□□□□ -1.09
SCN11AQ9UI33 SCARNA21.2-201ENST00000516600 166 ntBASIC8.25□□□□□ -1.09
SCN11AQ9UI33 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 TPRX1P1-201ENST00000557620 319 ntBASIC8.25□□□□□ -1.09
SCN11AQ9UI33 AC005229.3-201ENST00000603438 323 ntBASIC8.25□□□□□ -1.09
SCN11AQ9UI33 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 RFPL4AP6-201ENST00000616792 846 ntBASIC8.25□□□□□ -1.09
SCN11AQ9UI33 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 AC008627.1-201ENST00000517511 1704 ntBASIC8.25□□□□□ -1.09
SCN11AQ9UI33 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SCN11AQ9UI33 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SCN11AQ9UI33 AC027279.1-201ENST00000568885 4284 ntBASIC8.24□□□□□ -1.09
SCN11AQ9UI33 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SCN11AQ9UI33 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC8.24□□□□□ -1.09
SCN11AQ9UI33 SFTPD-AS1-201ENST00000608229 5001 ntBASIC8.24□□□□□ -1.09
SCN11AQ9UI33 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SCN11AQ9UI33 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
SCN11AQ9UI33 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SCN11AQ9UI33 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC8.24□□□□□ -1.09
SCN11AQ9UI33 BX322650.1-201ENST00000332359 2143 ntBASIC8.24□□□□□ -1.09
SCN11AQ9UI33 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
SCN11AQ9UI33 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SCN11AQ9UI33 RPS7P8-201ENST00000418311 581 ntBASIC8.24□□□□□ -1.09
SCN11AQ9UI33 RN7SL326P-201ENST00000477493 296 ntBASIC8.24□□□□□ -1.09
SCN11AQ9UI33 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC8.24□□□□□ -1.09
SCN11AQ9UI33 CR383658.1-201ENST00000514609 734 ntBASIC8.24□□□□□ -1.09
SCN11AQ9UI33 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC8.24□□□□□ -1.09
SCN11AQ9UI33 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC8.24□□□□□ -1.09
SCN11AQ9UI33 AC233702.7-202ENST00000582941 211 ntBASIC8.24□□□□□ -1.09
SCN11AQ9UI33 AP002345.2-201ENST00000609961 904 ntBASIC8.24□□□□□ -1.09
SCN11AQ9UI33 MIR6729-201ENST00000618194 65 ntBASIC8.24□□□□□ -1.09
SCN11AQ9UI33 AC020763.5-201ENST00000623298 430 ntBASIC8.24□□□□□ -1.09
SCN11AQ9UI33 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC8.24□□□□□ -1.09
SCN11AQ9UI33 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
SCN11AQ9UI33 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SCN11AQ9UI33 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SCN11AQ9UI33 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 IREB2-208ENST00000560440 4396 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 COX6B1P3-201ENST00000312310 260 ntBASIC8.23□□□□□ -1.09
SCN11AQ9UI33 OR7E25P-201ENST00000344844 931 ntBASIC8.23□□□□□ -1.09
SCN11AQ9UI33 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 RNA5SP500-201ENST00000364486 119 ntBASIC8.23□□□□□ -1.09
SCN11AQ9UI33 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 AL031985.1-201ENST00000392713 418 ntBASIC8.23□□□□□ -1.09
SCN11AQ9UI33 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 RN7SL705P-201ENST00000481678 294 ntBASIC8.23□□□□□ -1.09
SCN11AQ9UI33 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 AC092332.1-201ENST00000563684 829 ntBASIC8.23□□□□□ -1.09
SCN11AQ9UI33 NPM1P45-201ENST00000583151 559 ntBASIC8.23□□□□□ -1.09
SCN11AQ9UI33 MIR6886-201ENST00000619864 61 ntBASIC8.23□□□□□ -1.09
SCN11AQ9UI33 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 AC007406.5-201ENST00000570140 3170 ntBASIC8.23□□□□□ -1.09
SCN11AQ9UI33 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
SCN11AQ9UI33 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms