Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC9.41□□□□□ -0.9
USP35Q9P2H5 AC007448.1-201ENST00000582714 234 ntBASIC9.41□□□□□ -0.9
USP35Q9P2H5 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC9.41□□□□□ -0.9
USP35Q9P2H5 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC9.41□□□□□ -0.9
USP35Q9P2H5 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC9.41□□□□□ -0.9
USP35Q9P2H5 AC127071.1-201ENST00000624997 712 ntBASIC9.41□□□□□ -0.9
USP35Q9P2H5 TMEM75-201ENST00000624314 2165 ntBASIC9.41□□□□□ -0.9
USP35Q9P2H5 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
USP35Q9P2H5 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
USP35Q9P2H5 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
USP35Q9P2H5 AC007938.1-201ENST00000562524 2902 ntBASIC9.41□□□□□ -0.9
USP35Q9P2H5 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
USP35Q9P2H5 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
USP35Q9P2H5 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC9.41□□□□□ -0.9
USP35Q9P2H5 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC9.4□□□□□ -0.9
USP35Q9P2H5 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
USP35Q9P2H5 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
USP35Q9P2H5 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
USP35Q9P2H5 ENO1P4-201ENST00000416471 1785 ntBASIC9.4□□□□□ -0.9
USP35Q9P2H5 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
USP35Q9P2H5 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
USP35Q9P2H5 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
USP35Q9P2H5 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
USP35Q9P2H5 LPAL2-203ENST00000454031 2498 ntBASIC9.4□□□□□ -0.9
USP35Q9P2H5 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC9.4□□□□□ -0.9
USP35Q9P2H5 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
USP35Q9P2H5 MAPK10-270ENST00000641102 3538 ntBASIC9.4□□□□□ -0.9
USP35Q9P2H5 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
USP35Q9P2H5 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
USP35Q9P2H5 RNU1-55P-201ENST00000365510 158 ntBASIC9.4□□□□□ -0.9
USP35Q9P2H5 RNU6-1055P-201ENST00000391085 107 ntBASIC9.4□□□□□ -0.9
USP35Q9P2H5 FDPSP5-201ENST00000399474 1057 ntBASIC9.4□□□□□ -0.9
USP35Q9P2H5 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC9.4□□□□□ -0.9
USP35Q9P2H5 AL589994.1-201ENST00000404962 340 ntBASIC9.4□□□□□ -0.9
USP35Q9P2H5 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC9.4□□□□□ -0.9
USP35Q9P2H5 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
USP35Q9P2H5 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC9.4□□□□□ -0.9
USP35Q9P2H5 MTND3P4-201ENST00000453537 303 ntBASIC9.4□□□□□ -0.9
USP35Q9P2H5 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC9.4□□□□□ -0.9
USP35Q9P2H5 BX323845.2-201ENST00000458382 234 ntBASIC9.4□□□□□ -0.9
USP35Q9P2H5 AC093827.1-201ENST00000480094 861 ntBASIC9.4□□□□□ -0.9
USP35Q9P2H5 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC9.4□□□□□ -0.9
USP35Q9P2H5 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC9.4□□□□□ -0.9
USP35Q9P2H5 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC9.4□□□□□ -0.9
USP35Q9P2H5 MTCYBP44-201ENST00000514835 823 ntBASIC9.4□□□□□ -0.9
USP35Q9P2H5 KCTD9P6-201ENST00000522306 950 ntBASIC9.4□□□□□ -0.9
USP35Q9P2H5 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC9.4□□□□□ -0.9
USP35Q9P2H5 AC013283.1-201ENST00000557282 492 ntBASIC9.4□□□□□ -0.9
USP35Q9P2H5 AC009268.1-201ENST00000561352 1203 ntBASIC9.4□□□□□ -0.9
USP35Q9P2H5 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC9.4□□□□□ -0.9
USP35Q9P2H5 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC9.4□□□□□ -0.9
USP35Q9P2H5 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC9.4□□□□□ -0.9
USP35Q9P2H5 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
USP35Q9P2H5 CDY19P-201ENST00000411668 1613 ntBASIC9.4□□□□□ -0.9
USP35Q9P2H5 CDY18P-201ENST00000438294 1609 ntBASIC9.4□□□□□ -0.9
USP35Q9P2H5 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC9.4□□□□□ -0.9
USP35Q9P2H5 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC9.4□□□□□ -0.9
USP35Q9P2H5 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
USP35Q9P2H5 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
USP35Q9P2H5 SPATA31C1-201ENST00000420021 3895 ntBASIC9.4□□□□□ -0.91
USP35Q9P2H5 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
USP35Q9P2H5 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
USP35Q9P2H5 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
USP35Q9P2H5 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
USP35Q9P2H5 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
USP35Q9P2H5 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 IFIT1P1-201ENST00000400497 1449 ntBASIC9.39□□□□□ -0.91
USP35Q9P2H5 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
USP35Q9P2H5 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
USP35Q9P2H5 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
USP35Q9P2H5 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
USP35Q9P2H5 CUL4AP1-201ENST00000514750 1863 ntBASIC9.39□□□□□ -0.91
USP35Q9P2H5 AL132656.3-201ENST00000606384 1595 ntBASIC9.39□□□□□ -0.91
USP35Q9P2H5 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
USP35Q9P2H5 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
USP35Q9P2H5 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 AC007383.1-201ENST00000445875 636 ntBASIC9.39□□□□□ -0.91
USP35Q9P2H5 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 RHEBP1-201ENST00000448647 556 ntBASIC9.39□□□□□ -0.91
USP35Q9P2H5 AC093166.3-201ENST00000448785 303 ntBASIC9.39□□□□□ -0.91
USP35Q9P2H5 AC021006.1-201ENST00000489849 553 ntBASIC9.39□□□□□ -0.91
USP35Q9P2H5 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 AC079866.1-201ENST00000534985 1220 ntBASIC9.39□□□□□ -0.91
USP35Q9P2H5 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 AC026458.1-201ENST00000564330 438 ntBASIC9.39□□□□□ -0.91
USP35Q9P2H5 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC9.39□□□□□ -0.91
USP35Q9P2H5 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms