Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 AC068631.3-201ENST00000538831 225 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 RPSAP66-201ENST00000592196 606 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 ABI1P1-201ENST00000603375 1120 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 AL591222.2-201ENST00000604443 754 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 AC111186.1-201ENST00000604684 130 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 FGL2-202ENST00000637771 989 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 AL513548.1-201ENST00000562904 1724 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 AL591848.4-201ENST00000567832 3472 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 OR10D1P-201ENST00000355343 936 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 RNA5SP396-201ENST00000364834 120 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 ARMCX7P-201ENST00000372828 562 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 RPSAP1-201ENST00000421328 880 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 AC073464.3-201ENST00000422564 712 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 AC073900.1-201ENST00000429766 776 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 MRPS33P4-201ENST00000434892 317 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 SDHCP3-201ENST00000445371 506 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 THAP12P8-201ENST00000447914 2115 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 MORF4L1P4-201ENST00000450245 976 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 AC018892.2-201ENST00000457656 693 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 RN7SL152P-201ENST00000484176 298 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 AC087575.1-201ENST00000585087 229 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 AC006116.7-201ENST00000590141 756 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 AC005776.1-201ENST00000603164 290 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 AC096947.1-201ENST00000603233 470 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 AC073111.2-201ENST00000605657 1075 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 AC090912.3-201ENST00000609775 533 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 AL356608.1-201ENST00000610034 820 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 pRNA.9-201ENST00000618609 89 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 AL121985.3-201ENST00000620690 523 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 MAPK10-350ENST00000641777 965 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 AC005618.1-201ENST00000606901 3148 ntBASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.51□□□□□ -1.37
AMBRA1Q9C0C7 NEK2P4-201ENST00000425793 1329 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 AL512310.3-201ENST00000547023 1335 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 FADS2P1-201ENST00000611807 1446 ntBASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.5□□□□□ -1.37
AMBRA1Q9C0C7 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms