Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SSX3Q99909 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSX3Q99909 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC5.82□□□□□ -1.48
SSX3Q99909 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.82□□□□□ -1.48
SSX3Q99909 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
SSX3Q99909 RNU12-2P-201ENST00000364789 156 ntBASIC5.82□□□□□ -1.48
SSX3Q99909 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSX3Q99909 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SSX3Q99909 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC5.82□□□□□ -1.48
SSX3Q99909 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC5.82□□□□□ -1.48
SSX3Q99909 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSX3Q99909 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SSX3Q99909 MICG-208ENST00000416822 132 ntBASIC5.82□□□□□ -1.48
SSX3Q99909 GEMIN2P2-201ENST00000418195 715 ntBASIC5.82□□□□□ -1.48
SSX3Q99909 PPIAP23-201ENST00000420099 497 ntBASIC5.82□□□□□ -1.48
SSX3Q99909 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.82□□□□□ -1.48
SSX3Q99909 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.82□□□□□ -1.48
SSX3Q99909 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC5.82□□□□□ -1.48
SSX3Q99909 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.82□□□□□ -1.48
SSX3Q99909 MTCO3P17-201ENST00000443775 513 ntBASIC5.82□□□□□ -1.48
SSX3Q99909 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC5.82□□□□□ -1.48
SSX3Q99909 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSX3Q99909 AP002371.1-201ENST00000463604 433 ntBASIC5.82□□□□□ -1.48
SSX3Q99909 AC008967.1-201ENST00000504843 163 ntBASIC5.82□□□□□ -1.48
SSX3Q99909 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSX3Q99909 AC093815.1-201ENST00000508637 280 ntBASIC5.82□□□□□ -1.48
SSX3Q99909 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.82□□□□□ -1.48
SSX3Q99909 SCARNA18.2-201ENST00000516882 84 ntBASIC5.82□□□□□ -1.48
SSX3Q99909 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.82□□□□□ -1.48
SSX3Q99909 DCN-215ENST00000550099 719 ntTSL 2 BASIC5.82□□□□□ -1.48
SSX3Q99909 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC5.82□□□□□ -1.48
SSX3Q99909 OR4N3P-201ENST00000559395 818 ntBASIC5.82□□□□□ -1.48
SSX3Q99909 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC5.82□□□□□ -1.48
SSX3Q99909 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC5.82□□□□□ -1.48
SSX3Q99909 NDUFA3P4-201ENST00000560814 250 ntBASIC5.82□□□□□ -1.48
SSX3Q99909 AC126323.4-201ENST00000566935 234 ntBASIC5.82□□□□□ -1.48
SSX3Q99909 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC5.82□□□□□ -1.48
SSX3Q99909 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.82□□□□□ -1.48
SSX3Q99909 MIR6883-201ENST00000614952 78 ntBASIC5.82□□□□□ -1.48
SSX3Q99909 AL356752.1-201ENST00000615844 593 ntBASIC5.82□□□□□ -1.48
SSX3Q99909 AC022960.2-201ENST00000616300 666 ntBASIC5.82□□□□□ -1.48
SSX3Q99909 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC5.82□□□□□ -1.48
SSX3Q99909 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.82□□□□□ -1.48
SSX3Q99909 AC135068.4-201ENST00000622949 925 ntBASIC5.82□□□□□ -1.48
SSX3Q99909 AP003108.4-201ENST00000623917 878 ntBASIC5.82□□□□□ -1.48
SSX3Q99909 AC073857.1-201ENST00000625082 1054 ntBASIC5.82□□□□□ -1.48
SSX3Q99909 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.82□□□□□ -1.48
SSX3Q99909 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SSX3Q99909 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSX3Q99909 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
SSX3Q99909 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
SSX3Q99909 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.82□□□□□ -1.48
SSX3Q99909 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SSX3Q99909 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SSX3Q99909 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SSX3Q99909 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.82□□□□□ -1.48
SSX3Q99909 AP002512.4-202ENST00000641599 4530 ntBASIC5.82□□□□□ -1.48
SSX3Q99909 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.82□□□□□ -1.48
SSX3Q99909 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.82□□□□□ -1.48
SSX3Q99909 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.81□□□□□ -1.48
SSX3Q99909 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC5.81□□□□□ -1.48
SSX3Q99909 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC5.81□□□□□ -1.48
SSX3Q99909 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SSX3Q99909 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SSX3Q99909 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 MIR138-2-201ENST00000384916 84 ntBASIC5.81□□□□□ -1.48
SSX3Q99909 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SSX3Q99909 RNU4ATAC2P-201ENST00000408674 126 ntBASIC5.81□□□□□ -1.48
SSX3Q99909 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC5.81□□□□□ -1.48
SSX3Q99909 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.81□□□□□ -1.48
SSX3Q99909 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.81□□□□□ -1.48
SSX3Q99909 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.81□□□□□ -1.48
SSX3Q99909 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC5.81□□□□□ -1.48
SSX3Q99909 H3F3BP1-201ENST00000440551 403 ntBASIC5.81□□□□□ -1.48
SSX3Q99909 AC009237.4-201ENST00000441078 238 ntBASIC5.81□□□□□ -1.48
SSX3Q99909 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC5.81□□□□□ -1.48
SSX3Q99909 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.81□□□□□ -1.48
SSX3Q99909 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.81□□□□□ -1.48
SSX3Q99909 EAF2-202ENST00000451944 960 ntTSL 2 BASIC5.81□□□□□ -1.48
SSX3Q99909 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC5.81□□□□□ -1.48
SSX3Q99909 PABPC1P10-201ENST00000464731 381 ntBASIC5.81□□□□□ -1.48
SSX3Q99909 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SSX3Q99909 MTCO3P42-201ENST00000509488 518 ntBASIC5.81□□□□□ -1.48
SSX3Q99909 MTCO3P39-201ENST00000514812 518 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms