Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 TMEM108-AS1-202ENST00000505721 2427 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-CQ95604 AC051619.3-201ENST00000560646 2426 ntBASIC8.69□□□□□ -1.02
HLA-CQ95604 FHL1-201ENST00000345434 2458 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
HLA-CQ95604 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-CQ95604 CTNNA1-243ENST00000540387 2684 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-CQ95604 CAMK2G-204ENST00000351293 3563 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
HLA-CQ95604 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-CQ95604 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
HLA-CQ95604 EMC3-201ENST00000245046 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-CQ95604 MEIS1-216ENST00000560281 2773 ntTSL 5 BASIC8.68□□□□□ -1.02
HLA-CQ95604 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-CQ95604 SLC9B2-203ENST00000503103 1911 ntTSL 2 BASIC8.68□□□□□ -1.02
HLA-CQ95604 LINC00484-205ENST00000423719 3023 ntTSL 2 BASIC8.68□□□□□ -1.02
HLA-CQ95604 AL353132.1-201ENST00000415260 2043 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 ANKRD13C-202ENST00000370944 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-CQ95604 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-CQ95604 SERPINA1-206ENST00000437397 3340 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-CQ95604 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC8.68□□□□□ -1.02
HLA-CQ95604 THAP12P6-201ENST00000431978 2310 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 TPP1-201ENST00000299427 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-CQ95604 CORO2B-203ENST00000543950 3611 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
HLA-CQ95604 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-CQ95604 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
HLA-CQ95604 RNY4P14-201ENST00000363656 96 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC8.68□□□□□ -1.02
HLA-CQ95604 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC8.68□□□□□ -1.02
HLA-CQ95604 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC8.68□□□□□ -1.02
HLA-CQ95604 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC8.68□□□□□ -1.02
HLA-CQ95604 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC8.68□□□□□ -1.02
HLA-CQ95604 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC8.68□□□□□ -1.02
HLA-CQ95604 RPS29P5-201ENST00000452777 171 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 AL354872.1-201ENST00000456361 967 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC8.68□□□□□ -1.02
HLA-CQ95604 AC013267.1-201ENST00000458227 267 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 RPL7AP30-201ENST00000482859 796 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 EIF4E2P2-201ENST00000492033 736 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 CCDC11P1-201ENST00000503137 1162 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC8.68□□□□□ -1.02
HLA-CQ95604 AC093325.1-201ENST00000508378 326 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 AC106774.2-201ENST00000510266 406 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 AC091133.4-201ENST00000511142 308 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 AC117383.2-201ENST00000514722 322 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 MTHFD2P4-201ENST00000515074 1025 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 Y_RNA.701-201ENST00000516812 110 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 DCAF13-203ENST00000519682 837 ntTSL 2 BASIC8.68□□□□□ -1.02
HLA-CQ95604 OR9G2P-201ENST00000533326 880 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 AP002453.2-201ENST00000533503 320 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC8.68□□□□□ -1.02
HLA-CQ95604 OR7K1P-201ENST00000546439 926 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC8.68□□□□□ -1.02
HLA-CQ95604 NUTF2P2-201ENST00000551207 384 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC8.68□□□□□ -1.02
HLA-CQ95604 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC8.68□□□□□ -1.02
HLA-CQ95604 ANP32BP1-201ENST00000564205 1297 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC8.68□□□□□ -1.02
HLA-CQ95604 EIF4A1P9-201ENST00000576035 1207 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC8.68□□□□□ -1.02
HLA-CQ95604 AC022239.4-201ENST00000602626 504 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 AC008536.2-201ENST00000607284 349 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 SLC20A1P2-201ENST00000618036 966 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 ZNF155-209ENST00000611002 2732 ntAPPRIS P3 TSL 4 BASIC8.68□□□□□ -1.02
HLA-CQ95604 EEF1A1P11-201ENST00000415278 1389 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 AC130456.1-201ENST00000565085 1363 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 CASC19-206ENST00000641028 1430 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC8.68□□□□□ -1.02
HLA-CQ95604 AL157713.1-201ENST00000379752 1531 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-CQ95604 RAD54L-201ENST00000371975 3108 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-CQ95604 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
HLA-CQ95604 TRHR-202ENST00000518632 1660 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
HLA-CQ95604 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-CQ95604 AL669831.5-218ENST00000591702 1873 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 ADGRG5-201ENST00000340339 3767 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-CQ95604 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-CQ95604 EPS15P1-202ENST00000459691 2071 ntBASIC8.68□□□□□ -1.02
HLA-CQ95604 LY9-203ENST00000368037 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
HLA-CQ95604 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-CQ95604 NOP2-202ENST00000382421 2736 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-CQ95604 EFTUD2-201ENST00000402521 3045 ntTSL 2 BASIC8.67□□□□□ -1.02
HLA-CQ95604 MYRFL-205ENST00000552032 3139 ntAPPRIS P2 TSL 5 BASIC8.67□□□□□ -1.02
HLA-CQ95604 THSD4-203ENST00000357769 3403 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-CQ95604 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-CQ95604 WWC1-209ENST00000521089 3562 ntAPPRIS ALT1 TSL 2 BASIC8.67□□□□□ -1.02
HLA-CQ95604 TRIM9-203ENST00000360392 3726 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-CQ95604 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-CQ95604 PTAFR-203ENST00000539896 4191 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
HLA-CQ95604 LILRA2-201ENST00000251376 4429 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-CQ95604 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-CQ95604 CSGALNACT1-201ENST00000332246 3872 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-CQ95604 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-CQ95604 HNRNPA1L2-201ENST00000357495 3011 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
HLA-CQ95604 FANK1-201ENST00000368689 522 ntTSL 3 BASIC8.67□□□□□ -1.02
HLA-CQ95604 PRUNE1-204ENST00000368936 2788 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-CQ95604 XKRX-201ENST00000372956 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-CQ95604 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HLA-CQ95604 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC8.67□□□□□ -1.02
HLA-CQ95604 ACSL6-203ENST00000379240 2548 ntAPPRIS ALT1 TSL 5 BASIC8.67□□□□□ -1.02
HLA-CQ95604 Y_RNA.548-201ENST00000384656 105 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 Y_RNA.573-201ENST00000384763 105 ntBASIC8.67□□□□□ -1.02
HLA-CQ95604 TYRP1-203ENST00000388918 2851 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms