Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC018765.1-201ENST00000623357 3446 ntBASIC6.75□□□□□ -1.33
LIMK2P53671 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
LIMK2P53671 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.75□□□□□ -1.33
LIMK2P53671 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LIMK2P53671 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LIMK2P53671 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
LIMK2P53671 AC067942.1-201ENST00000488045 1493 ntBASIC6.75□□□□□ -1.33
LIMK2P53671 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LIMK2P53671 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LIMK2P53671 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
LIMK2P53671 RN7SKP191-201ENST00000364713 306 ntBASIC6.75□□□□□ -1.33
LIMK2P53671 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
LIMK2P53671 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LIMK2P53671 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.75□□□□□ -1.33
LIMK2P53671 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.75□□□□□ -1.33
LIMK2P53671 PTPN2P1-201ENST00000423212 1072 ntBASIC6.75□□□□□ -1.33
LIMK2P53671 AKR1B10P1-201ENST00000425765 942 ntBASIC6.75□□□□□ -1.33
LIMK2P53671 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.75□□□□□ -1.33
LIMK2P53671 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.75□□□□□ -1.33
LIMK2P53671 AC083855.1-201ENST00000440041 258 ntBASIC6.75□□□□□ -1.33
LIMK2P53671 RPL12P49-201ENST00000441100 121 ntBASIC6.75□□□□□ -1.33
LIMK2P53671 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.75□□□□□ -1.33
LIMK2P53671 AC114324.2-202ENST00000503812 134 ntBASIC6.75□□□□□ -1.33
LIMK2P53671 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.75□□□□□ -1.33
LIMK2P53671 SNORA58-201ENST00000505219 137 ntBASIC6.75□□□□□ -1.33
LIMK2P53671 AC137549.1-201ENST00000514243 533 ntBASIC6.75□□□□□ -1.33
LIMK2P53671 LDHBP3-201ENST00000514909 822 ntBASIC6.75□□□□□ -1.33
LIMK2P53671 AP005902.2-201ENST00000518393 307 ntBASIC6.75□□□□□ -1.33
LIMK2P53671 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
LIMK2P53671 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LIMK2P53671 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.75□□□□□ -1.33
LIMK2P53671 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC6.75□□□□□ -1.33
LIMK2P53671 AC024267.2-201ENST00000582737 417 ntBASIC6.75□□□□□ -1.33
LIMK2P53671 AC067852.5-201ENST00000589299 310 ntBASIC6.75□□□□□ -1.33
LIMK2P53671 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.75□□□□□ -1.33
LIMK2P53671 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.75□□□□□ -1.33
LIMK2P53671 AC036176.3-201ENST00000602456 418 ntBASIC6.75□□□□□ -1.33
LIMK2P53671 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.75□□□□□ -1.33
LIMK2P53671 AC012653.2-201ENST00000621880 420 ntBASIC6.75□□□□□ -1.33
LIMK2P53671 SNORA16A-202ENST00000628458 135 ntBASIC6.75□□□□□ -1.33
LIMK2P53671 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.75□□□□□ -1.33
LIMK2P53671 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LIMK2P53671 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
LIMK2P53671 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
LIMK2P53671 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.75□□□□□ -1.33
LIMK2P53671 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
LIMK2P53671 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LIMK2P53671 DLEU2L-201ENST00000371086 3555 ntBASIC6.75□□□□□ -1.33
LIMK2P53671 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.75□□□□□ -1.33
LIMK2P53671 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.75□□□□□ -1.33
LIMK2P53671 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LIMK2P53671 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LIMK2P53671 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.75□□□□□ -1.33
LIMK2P53671 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LIMK2P53671 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIMK2P53671 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
LIMK2P53671 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.74□□□□□ -1.33
LIMK2P53671 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIMK2P53671 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
LIMK2P53671 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIMK2P53671 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.74□□□□□ -1.33
LIMK2P53671 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.74□□□□□ -1.33
LIMK2P53671 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.74□□□□□ -1.33
LIMK2P53671 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIMK2P53671 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIMK2P53671 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIMK2P53671 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.74□□□□□ -1.33
LIMK2P53671 RN7SKP189-201ENST00000365042 330 ntBASIC6.74□□□□□ -1.33
LIMK2P53671 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.74□□□□□ -1.33
LIMK2P53671 MIR191-201ENST00000384873 92 ntBASIC6.74□□□□□ -1.33
LIMK2P53671 AL353133.1-201ENST00000407695 401 ntBASIC6.74□□□□□ -1.33
LIMK2P53671 CYCSP17-201ENST00000407870 315 ntBASIC6.74□□□□□ -1.33
LIMK2P53671 AC099535.1-201ENST00000408928 371 ntBASIC6.74□□□□□ -1.33
LIMK2P53671 NPM1P36-201ENST00000415681 835 ntBASIC6.74□□□□□ -1.33
LIMK2P53671 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.74□□□□□ -1.33
LIMK2P53671 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.74□□□□□ -1.33
LIMK2P53671 AL451136.1-201ENST00000435399 325 ntBASIC6.74□□□□□ -1.33
LIMK2P53671 E2F6P3-201ENST00000441743 743 ntBASIC6.74□□□□□ -1.33
LIMK2P53671 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.74□□□□□ -1.33
LIMK2P53671 RN7SKP198-201ENST00000459286 306 ntBASIC6.74□□□□□ -1.33
LIMK2P53671 RPS26P11-201ENST00000463445 348 ntBASIC6.74□□□□□ -1.33
LIMK2P53671 RPS26P6-201ENST00000475156 348 ntBASIC6.74□□□□□ -1.33
LIMK2P53671 PPP1R2P6-201ENST00000478565 588 ntBASIC6.74□□□□□ -1.33
LIMK2P53671 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.74□□□□□ -1.33
LIMK2P53671 RNA5SP278-201ENST00000517055 102 ntBASIC6.74□□□□□ -1.33
LIMK2P53671 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.74□□□□□ -1.33
LIMK2P53671 DPPA3P2-201ENST00000553589 478 ntBASIC6.74□□□□□ -1.33
LIMK2P53671 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.74□□□□□ -1.33
LIMK2P53671 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.74□□□□□ -1.33
LIMK2P53671 AC138207.8-204ENST00000579588 527 ntBASIC6.74□□□□□ -1.33
LIMK2P53671 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
LIMK2P53671 RPS4XP21-201ENST00000603814 750 ntBASIC6.74□□□□□ -1.33
LIMK2P53671 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.74□□□□□ -1.33
LIMK2P53671 AC015819.1-201ENST00000613588 663 ntBASIC6.74□□□□□ -1.33
LIMK2P53671 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.74□□□□□ -1.33
LIMK2P53671 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.74□□□□□ -1.33
LIMK2P53671 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.74□□□□□ -1.33
LIMK2P53671 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LIMK2P53671 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.74□□□□□ -1.33
LIMK2P53671 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms