Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 RN7SKP17-201ENST00000411242 351 ntBASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 AL663061.1-201ENST00000416625 580 ntBASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 FTOP1-201ENST00000419363 861 ntBASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 AL357632.1-201ENST00000426688 643 ntBASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 RPS13P2-201ENST00000437890 455 ntBASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 BX005266.3-201ENST00000443013 1075 ntBASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 RPL5P10-201ENST00000445207 894 ntBASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 GTF2F2P2-201ENST00000445825 721 ntBASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 AC139713.1-202ENST00000512366 460 ntBASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 MIR3689C-201ENST00000581239 72 ntBASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 AL023806.2-201ENST00000603042 263 ntBASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 AL137190.1-201ENST00000603288 282 ntBASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 AC007255.2-201ENST00000604053 631 ntBASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 RN7SL3-201ENST00000610674 299 ntBASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 MIR6807-201ENST00000621968 92 ntBASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 AC073488.7-201ENST00000633785 778 ntBASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 AC000095.2-202ENST00000637415 154 ntBASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 AC130360.2-201ENST00000533477 1556 ntBASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RBFOX3A6NFN3 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AC006600.2-201ENST00000624834 2506 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AL138847.1-201ENST00000258651 546 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 MRPS21P2-201ENST00000424704 264 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 RPL6P2-201ENST00000425480 783 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AC092651.1-201ENST00000426110 312 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 Z68868.1-201ENST00000429048 544 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AC079922.1-201ENST00000443291 359 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 OR13K1P-201ENST00000444577 975 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 VN1R38P-201ENST00000450265 887 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AP000805.1-201ENST00000471604 784 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 RN7SL187P-201ENST00000495587 303 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 RN7SL124P-201ENST00000498656 285 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AC114300.1-201ENST00000502347 280 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 GAPDHP38-201ENST00000503632 1002 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AF186996.3-201ENST00000509527 964 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 GLYATL1P4-201ENST00000529326 906 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 OR4A40P-201ENST00000533878 948 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 DPPA3P2-202ENST00000557188 1219 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 OR4H6P-201ENST00000563771 921 ntBASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.19□□□□□ -1.58
RBFOX3A6NFN3 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms