Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC011921.2-201ENST00000589465 152 ntBASIC6.53□□□□□ -1.36
CDH13P55290 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.53□□□□□ -1.36
CDH13P55290 AL590032.1-201ENST00000604920 252 ntBASIC6.53□□□□□ -1.36
CDH13P55290 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.53□□□□□ -1.36
CDH13P55290 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.53□□□□□ -1.36
CDH13P55290 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.53□□□□□ -1.36
CDH13P55290 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.53□□□□□ -1.36
CDH13P55290 AC243725.1-201ENST00000637164 436 ntBASIC6.53□□□□□ -1.36
CDH13P55290 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.53□□□□□ -1.36
CDH13P55290 AC138627.1-204ENST00000641894 765 ntBASIC6.53□□□□□ -1.36
CDH13P55290 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
CDH13P55290 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CDH13P55290 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH13P55290 TRIM53CP-201ENST00000531490 1354 ntBASIC6.53□□□□□ -1.36
CDH13P55290 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.53□□□□□ -1.36
CDH13P55290 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.53□□□□□ -1.36
CDH13P55290 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH13P55290 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH13P55290 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.53□□□□□ -1.36
CDH13P55290 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.53□□□□□ -1.36
CDH13P55290 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDH13P55290 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDH13P55290 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDH13P55290 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
CDH13P55290 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
CDH13P55290 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
CDH13P55290 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.52□□□□□ -1.36
CDH13P55290 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.52□□□□□ -1.36
CDH13P55290 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.52□□□□□ -1.36
CDH13P55290 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH13P55290 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH13P55290 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH13P55290 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH13P55290 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.37
CDH13P55290 ZNF806-201ENST00000438300 1774 ntBASIC6.52□□□□□ -1.37
CDH13P55290 CUBNP3-201ENST00000457461 1784 ntBASIC6.52□□□□□ -1.37
CDH13P55290 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH13P55290 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CDH13P55290 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.52□□□□□ -1.37
CDH13P55290 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH13P55290 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDH13P55290 PARP4P1-201ENST00000435945 2337 ntBASIC6.52□□□□□ -1.37
CDH13P55290 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.52□□□□□ -1.37
CDH13P55290 RNA5SP176-201ENST00000390956 110 ntBASIC6.52□□□□□ -1.37
CDH13P55290 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC6.52□□□□□ -1.37
CDH13P55290 AL451136.1-201ENST00000435399 325 ntBASIC6.52□□□□□ -1.37
CDH13P55290 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.52□□□□□ -1.37
CDH13P55290 AC027124.1-201ENST00000440852 466 ntBASIC6.52□□□□□ -1.37
CDH13P55290 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.52□□□□□ -1.37
CDH13P55290 AC068491.1-201ENST00000449539 1241 ntBASIC6.52□□□□□ -1.37
CDH13P55290 RPL7AP71-201ENST00000451120 739 ntBASIC6.52□□□□□ -1.37
CDH13P55290 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC6.52□□□□□ -1.37
CDH13P55290 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CDH13P55290 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.52□□□□□ -1.37
CDH13P55290 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC6.52□□□□□ -1.37
CDH13P55290 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC6.52□□□□□ -1.37
CDH13P55290 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.52□□□□□ -1.37
CDH13P55290 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.52□□□□□ -1.37
CDH13P55290 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.52□□□□□ -1.37
CDH13P55290 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC6.52□□□□□ -1.37
CDH13P55290 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CDH13P55290 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.52□□□□□ -1.37
CDH13P55290 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC6.52□□□□□ -1.37
CDH13P55290 MIR6731-201ENST00000614863 72 ntBASIC6.52□□□□□ -1.37
CDH13P55290 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC6.52□□□□□ -1.37
CDH13P55290 AC007347.2-201ENST00000623044 180 ntBASIC6.52□□□□□ -1.37
CDH13P55290 AC017037.4-201ENST00000624526 826 ntBASIC6.52□□□□□ -1.37
CDH13P55290 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.52□□□□□ -1.37
CDH13P55290 MIR665-201ENST00000635949 72 ntBASIC6.52□□□□□ -1.37
CDH13P55290 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.52□□□□□ -1.37
CDH13P55290 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH13P55290 AC022034.1-201ENST00000512867 2156 ntBASIC6.52□□□□□ -1.37
CDH13P55290 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH13P55290 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CDH13P55290 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH13P55290 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH13P55290 AC004014.2-201ENST00000623718 5122 ntBASIC6.52□□□□□ -1.37
CDH13P55290 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH13P55290 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDH13P55290 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.51□□□□□ -1.37
CDH13P55290 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.51□□□□□ -1.37
CDH13P55290 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CDH13P55290 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDH13P55290 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDH13P55290 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.51□□□□□ -1.37
CDH13P55290 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CDH13P55290 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.51□□□□□ -1.37
CDH13P55290 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDH13P55290 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDH13P55290 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CDH13P55290 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDH13P55290 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CDH13P55290 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDH13P55290 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CDH13P55290 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.51□□□□□ -1.37
CDH13P55290 RN7SKP30-201ENST00000411373 334 ntBASIC6.51□□□□□ -1.37
CDH13P55290 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CDH13P55290 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.51□□□□□ -1.37
CDH13P55290 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CDH13P55290 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms