Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.06□□□□□ -1.28
APOEP02649 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
APOEP02649 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.06□□□□□ -1.28
APOEP02649 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
APOEP02649 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.06□□□□□ -1.28
APOEP02649 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.06□□□□□ -1.28
APOEP02649 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
APOEP02649 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
APOEP02649 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
APOEP02649 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC7.05□□□□□ -1.28
APOEP02649 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.05□□□□□ -1.28
APOEP02649 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.05□□□□□ -1.28
APOEP02649 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.05□□□□□ -1.28
APOEP02649 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
APOEP02649 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
APOEP02649 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
APOEP02649 RBMY1A3P-201ENST00000382670 1404 ntBASIC7.05□□□□□ -1.28
APOEP02649 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
APOEP02649 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.05□□□□□ -1.28
APOEP02649 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
APOEP02649 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
APOEP02649 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.05□□□□□ -1.28
APOEP02649 MIR541-201ENST00000401360 84 ntBASIC7.05□□□□□ -1.28
APOEP02649 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.05□□□□□ -1.28
APOEP02649 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
APOEP02649 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.05□□□□□ -1.28
APOEP02649 PSMD8P1-201ENST00000436275 769 ntBASIC7.05□□□□□ -1.28
APOEP02649 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC7.05□□□□□ -1.28
APOEP02649 SNRPBP1-201ENST00000443634 282 ntBASIC7.05□□□□□ -1.28
APOEP02649 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC7.05□□□□□ -1.28
APOEP02649 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC7.05□□□□□ -1.28
APOEP02649 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.05□□□□□ -1.28
APOEP02649 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
APOEP02649 RPL23AP28-201ENST00000448062 470 ntBASIC7.05□□□□□ -1.28
APOEP02649 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.05□□□□□ -1.28
APOEP02649 AC022080.2-201ENST00000452932 533 ntBASIC7.05□□□□□ -1.28
APOEP02649 HNRNPDLP2-201ENST00000455248 751 ntBASIC7.05□□□□□ -1.28
APOEP02649 RN7SL790P-201ENST00000474043 298 ntBASIC7.05□□□□□ -1.28
APOEP02649 RN7SL143P-201ENST00000496780 297 ntBASIC7.05□□□□□ -1.28
APOEP02649 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC7.05□□□□□ -1.28
APOEP02649 AC122713.1-201ENST00000518368 1015 ntBASIC7.05□□□□□ -1.28
APOEP02649 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC7.05□□□□□ -1.28
APOEP02649 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.05□□□□□ -1.28
APOEP02649 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.05□□□□□ -1.28
APOEP02649 SETP17-201ENST00000534163 817 ntBASIC7.05□□□□□ -1.28
APOEP02649 AC140063.1-201ENST00000541343 259 ntBASIC7.05□□□□□ -1.28
APOEP02649 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.05□□□□□ -1.28
APOEP02649 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC7.05□□□□□ -1.28
APOEP02649 CHEK2P2-201ENST00000554701 672 ntBASIC7.05□□□□□ -1.28
APOEP02649 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC7.05□□□□□ -1.28
APOEP02649 HMGN1P26-201ENST00000558737 303 ntBASIC7.05□□□□□ -1.28
APOEP02649 AC018558.5-201ENST00000565840 952 ntBASIC7.05□□□□□ -1.28
APOEP02649 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC7.05□□□□□ -1.28
APOEP02649 MIR5095-201ENST00000578844 88 ntBASIC7.05□□□□□ -1.28
APOEP02649 CTSLP2-201ENST00000580501 394 ntBASIC7.05□□□□□ -1.28
APOEP02649 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
APOEP02649 AC025287.2-201ENST00000621911 668 ntBASIC7.05□□□□□ -1.28
APOEP02649 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC7.05□□□□□ -1.28
APOEP02649 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.05□□□□□ -1.28
APOEP02649 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
APOEP02649 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
APOEP02649 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
APOEP02649 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
APOEP02649 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.05□□□□□ -1.28
APOEP02649 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
APOEP02649 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.05□□□□□ -1.28
APOEP02649 AL596244.1-201ENST00000567068 3779 ntBASIC7.05□□□□□ -1.28
APOEP02649 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
APOEP02649 AC105114.1-201ENST00000624795 1862 ntBASIC7.04□□□□□ -1.28
APOEP02649 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.04□□□□□ -1.28
APOEP02649 AC119674.1-204ENST00000641348 1343 ntBASIC7.04□□□□□ -1.28
APOEP02649 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
APOEP02649 AC110597.1-201ENST00000562669 3176 ntBASIC7.04□□□□□ -1.28
APOEP02649 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.04□□□□□ -1.28
APOEP02649 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
APOEP02649 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
APOEP02649 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
APOEP02649 UBBP1-201ENST00000392399 473 ntBASIC7.04□□□□□ -1.28
APOEP02649 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.04□□□□□ -1.28
APOEP02649 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.04□□□□□ -1.28
APOEP02649 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.04□□□□□ -1.28
APOEP02649 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC7.04□□□□□ -1.28
APOEP02649 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.04□□□□□ -1.28
APOEP02649 GAPDHP20-201ENST00000444107 1007 ntBASIC7.04□□□□□ -1.28
APOEP02649 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC7.04□□□□□ -1.28
APOEP02649 PPIAP32-201ENST00000449940 472 ntBASIC7.04□□□□□ -1.28
APOEP02649 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC7.04□□□□□ -1.28
APOEP02649 AC063955.1-201ENST00000462872 685 ntBASIC7.04□□□□□ -1.28
APOEP02649 RPS4XP17-201ENST00000479057 754 ntBASIC7.04□□□□□ -1.28
APOEP02649 MINOS1P4-201ENST00000515470 318 ntBASIC7.04□□□□□ -1.28
APOEP02649 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC7.04□□□□□ -1.28
APOEP02649 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC7.04□□□□□ -1.28
APOEP02649 NIFKP4-201ENST00000567275 1192 ntBASIC7.04□□□□□ -1.28
APOEP02649 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC7.04□□□□□ -1.28
APOEP02649 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC7.04□□□□□ -1.28
APOEP02649 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC7.04□□□□□ -1.28
APOEP02649 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.04□□□□□ -1.28
APOEP02649 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
APOEP02649 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
APOEP02649 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms