Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AC112198.1-201ENST00000505369 1220 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 NAP1L1P1-201ENST00000524793 1063 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 ACTN1-AS1-201ENST00000553944 484 ntTSL 3 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 OTX2-204ENST00000554788 835 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 APOOP5-202ENST00000564761 566 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AC002519.2-203ENST00000567043 837 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AC005730.3-201ENST00000583067 366 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AC091147.1-201ENST00000583290 510 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 MIR4999-201ENST00000585029 91 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AC060766.2-201ENST00000588235 334 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AL021808.1-201ENST00000604325 1117 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AC012511.1-201ENST00000608140 449 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AC116003.3-201ENST00000612669 541 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 ST7-OT4_3.1-201ENST00000615542 293 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AC027139.2-201ENST00000615639 448 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AC239859.6-201ENST00000622095 213 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AC048380.3-201ENST00000623145 796 ntBASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 AL137782.1-201ENST00000563635 4128 ntTSL 5 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 ARL6IP5-201ENST00000273258 2101 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 PSG8-203ENST00000404209 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
CUEDC1Q9NWM3 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AL512504.2-201ENST00000445455 1909 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AOX2P-204ENST00000487742 3284 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 LINC00837-201ENST00000443246 3991 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 MOSPD1-203ENST00000370783 2364 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AC024337.1-201ENST00000558860 1562 ntTSL 4 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AC091305.2-201ENST00000624049 1576 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 GNA12-203ENST00000407904 3918 ntTSL 2 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 IFT46-201ENST00000264020 1819 ntTSL 2 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 RNF214-204ENST00000530849 2846 ntTSL 5 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 TGIF2LY-201ENST00000321217 905 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 RPL12-201ENST00000361436 633 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 Y_RNA.162-201ENST00000363683 102 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 COX7A2-201ENST00000370081 914 ntAPPRIS P2 TSL 3 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 SNORA14B-201ENST00000384452 135 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 MTCO1P56-201ENST00000401674 224 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 CCDC134-202ENST00000402061 525 ntTSL 2 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 RCAN3-203ENST00000412742 667 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AKR1B1P8-201ENST00000418396 936 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 ENTPD3-AS1-201ENST00000420850 791 ntTSL 2 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AL513318.1-201ENST00000437925 991 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 RPS29P16-201ENST00000452798 171 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 OR5S1P-201ENST00000453063 951 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 RPL7P1-201ENST00000468161 747 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AC023245.1-201ENST00000468501 517 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 RPL7P9-201ENST00000468715 747 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AC008667.3-201ENST00000506892 553 ntTSL 4 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AC021146.7-201ENST00000509604 775 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 GAPDHP44-201ENST00000513513 1007 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AC020688.1-201ENST00000519282 1248 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 IMPA1P1-202ENST00000522318 332 ntTSL 2 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 OR5D2P-201ENST00000524390 911 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 RNF185-AS1-201ENST00000526089 353 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 LINC01499-201ENST00000528720 553 ntTSL 4 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 VDAC2P2-201ENST00000544463 901 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 SLC25A3P2-201ENST00000547720 880 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 EIF4A3P1-201ENST00000578499 647 ntBASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC8.11□□□□□ -1.11
CUEDC1Q9NWM3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms