Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SNX18Q96RF0 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 AL157713.1-201ENST00000379752 1531 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 AL592494.2-201ENST00000425455 1548 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNX18Q96RF0 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SNX18Q96RF0 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNX18Q96RF0 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNX18Q96RF0 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SNX18Q96RF0 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNX18Q96RF0 SAMMSON-210ENST00000641260 1308 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNX18Q96RF0 AL136298.2-201ENST00000556497 1570 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SNX18Q96RF0 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SNX18Q96RF0 FO082842.1-201ENST00000423552 1370 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 AL512283.1-201ENST00000606756 1384 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNX18Q96RF0 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNX18Q96RF0 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNX18Q96RF0 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNX18Q96RF0 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 MAPK10-261ENST00000641050 3109 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNX18Q96RF0 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SNX18Q96RF0 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 SNORA73B-201ENST00000363217 204 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 RNA5SP355-201ENST00000365317 135 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 SNORA70.9-201ENST00000384370 135 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 AL589655.1-201ENST00000405398 482 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 AC092646.1-201ENST00000427142 901 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 NDUFA5P1-201ENST00000433858 341 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 HMGN1P6-201ENST00000438508 291 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 PRDX1P1-201ENST00000449329 596 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 AL356390.1-201ENST00000455684 397 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SNX18Q96RF0 RPS4XP23-201ENST00000487801 237 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNX18Q96RF0 AC010409.2-201ENST00000505780 478 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 PGAM4P2-201ENST00000512491 721 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 RNA5SP75-201ENST00000516841 111 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 AP003049.1-201ENST00000529418 457 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 COX6CP11-201ENST00000555293 229 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 LINC00557-201ENST00000563184 1279 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 MTND1P8-201ENST00000571424 950 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 MIR744-201ENST00000578242 98 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 OR7A8P-201ENST00000595427 913 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 AL391834.1-201ENST00000609609 560 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 AC084824.5-201ENST00000612009 413 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 PCA3_2.1-201ENST00000612507 409 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 AC004943.1-203ENST00000624370 1074 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 FGL2-202ENST00000637771 989 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 AC104837.1-201ENST00000444644 1587 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNX18Q96RF0 SSXP3-201ENST00000442971 1300 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 AC007114.2-201ENST00000576014 4281 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 AC007998.4-201ENST00000612496 2533 ntBASIC6.42□□□□□ -1.38
SNX18Q96RF0 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SNX18Q96RF0 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SNX18Q96RF0 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SNX18Q96RF0 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNX18Q96RF0 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.42□□□□□ -1.38
SNX18Q96RF0 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.41□□□□□ -1.38
SNX18Q96RF0 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 AC110597.1-201ENST00000562669 3176 ntBASIC6.41□□□□□ -1.38
SNX18Q96RF0 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNX18Q96RF0 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms