Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 AL158214.1-201ENST00000444423 404 ntBASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 AC083806.1-201ENST00000468934 316 ntBASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 RPL5P12-201ENST00000477071 851 ntBASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 RN7SL868P-201ENST00000485915 303 ntBASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 SUMO2P7-201ENST00000511179 285 ntBASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 AC114940.1-201ENST00000512162 1265 ntBASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 RNA5SP75-201ENST00000516841 111 ntBASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 RNA5SP278-201ENST00000517055 102 ntBASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 FXNP1-201ENST00000555153 337 ntBASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 AL132640.1-201ENST00000559594 619 ntBASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 FCGR1CP-201ENST00000579737 1127 ntBASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 AC023389.2-201ENST00000580031 955 ntBASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 AC012065.3-201ENST00000602736 439 ntBASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 BNIP3P7-201ENST00000605641 516 ntBASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 AC245407.2-201ENST00000614199 451 ntBASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 AC073857.1-201ENST00000625082 1054 ntBASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 AL391262.1-201ENST00000556558 1992 ntBASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 TET1P1-201ENST00000426627 2301 ntBASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 AC092821.2-201ENST00000545710 2042 ntBASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 CYCSP17-201ENST00000407870 315 ntBASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 MORN2-202ENST00000409077 465 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 ZNF92P1Y-201ENST00000415010 1191 ntBASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 TRIM60P13-201ENST00000432350 1283 ntBASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 KATNBL1P2-201ENST00000433311 835 ntBASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 SCDP1-201ENST00000455244 1081 ntBASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 AGGF1P3-201ENST00000493675 1213 ntBASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 AP001960.1-201ENST00000506494 658 ntBASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 OR10J9P-201ENST00000511932 987 ntBASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 AC106800.2-201ENST00000514009 1103 ntBASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 AC092375.1-201ENST00000550410 637 ntBASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 BX322635.1-201ENST00000605804 496 ntBASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 AC073575.2-201ENST00000614212 627 ntBASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 AC017037.4-201ENST00000624526 826 ntBASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 AC005355.2-201ENST00000625064 484 ntBASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
CDK5RAP3Q96JB5 AL133243.4-201ENST00000623116 3109 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 ASNSP6-201ENST00000592770 1618 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 AP004289.1-201ENST00000436307 2205 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms