Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
NEK3P51956 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
NEK3P51956 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
NEK3P51956 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.21□□□□□ -1.25
NEK3P51956 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
NEK3P51956 MIR152-201ENST00000385212 87 ntBASIC7.21□□□□□ -1.26
NEK3P51956 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NEK3P51956 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7.21□□□□□ -1.26
NEK3P51956 NACAP7-201ENST00000407371 609 ntBASIC7.21□□□□□ -1.26
NEK3P51956 OR52N3P-201ENST00000413417 934 ntBASIC7.21□□□□□ -1.26
NEK3P51956 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC7.21□□□□□ -1.26
NEK3P51956 VDAC1P10-201ENST00000416715 891 ntBASIC7.21□□□□□ -1.26
NEK3P51956 ARAFP1-201ENST00000422172 605 ntBASIC7.21□□□□□ -1.26
NEK3P51956 PSMC1P2-201ENST00000423961 1204 ntBASIC7.21□□□□□ -1.26
NEK3P51956 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC7.21□□□□□ -1.26
NEK3P51956 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
NEK3P51956 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC7.21□□□□□ -1.26
NEK3P51956 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC7.21□□□□□ -1.26
NEK3P51956 AL356133.1-201ENST00000444762 372 ntBASIC7.21□□□□□ -1.26
NEK3P51956 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC7.21□□□□□ -1.26
NEK3P51956 RBMY2EP-202ENST00000456360 940 ntBASIC7.21□□□□□ -1.26
NEK3P51956 CTSLP6-201ENST00000458273 1002 ntBASIC7.21□□□□□ -1.26
NEK3P51956 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC7.21□□□□□ -1.26
NEK3P51956 AC114940.1-201ENST00000512162 1265 ntBASIC7.21□□□□□ -1.26
NEK3P51956 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC7.21□□□□□ -1.26
NEK3P51956 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC7.21□□□□□ -1.26
NEK3P51956 AP001803.1-201ENST00000525668 147 ntBASIC7.21□□□□□ -1.26
NEK3P51956 GLYATL1P4-201ENST00000529326 906 ntBASIC7.21□□□□□ -1.26
NEK3P51956 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC7.21□□□□□ -1.26
NEK3P51956 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NEK3P51956 FXNP1-201ENST00000555153 337 ntBASIC7.21□□□□□ -1.26
NEK3P51956 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.21□□□□□ -1.26
NEK3P51956 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.21□□□□□ -1.26
NEK3P51956 OR7E19P-202ENST00000589942 844 ntBASIC7.21□□□□□ -1.26
NEK3P51956 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.21□□□□□ -1.26
NEK3P51956 AC245407.2-201ENST00000614199 451 ntBASIC7.21□□□□□ -1.26
NEK3P51956 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7.21□□□□□ -1.26
NEK3P51956 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.21□□□□□ -1.26
NEK3P51956 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.26
NEK3P51956 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NEK3P51956 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NEK3P51956 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
NEK3P51956 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.21□□□□□ -1.26
NEK3P51956 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.21□□□□□ -1.26
NEK3P51956 AL117339.4-201ENST00000608335 7063 ntBASIC7.21□□□□□ -1.26
NEK3P51956 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.21□□□□□ -1.26
NEK3P51956 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.21□□□□□ -1.26
NEK3P51956 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NEK3P51956 AL121949.2-201ENST00000403446 1548 ntBASIC7.21□□□□□ -1.26
NEK3P51956 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
NEK3P51956 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.21□□□□□ -1.26
NEK3P51956 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
NEK3P51956 MTCO1P25-201ENST00000414449 1799 ntBASIC7.2□□□□□ -1.26
NEK3P51956 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.2□□□□□ -1.26
NEK3P51956 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NEK3P51956 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.2□□□□□ -1.26
NEK3P51956 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
NEK3P51956 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
NEK3P51956 AC061975.5-201ENST00000584928 1441 ntBASIC7.2□□□□□ -1.26
NEK3P51956 MAPK10-344ENST00000641718 3746 ntBASIC7.2□□□□□ -1.26
NEK3P51956 AL596244.1-201ENST00000567068 3779 ntBASIC7.2□□□□□ -1.26
NEK3P51956 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NEK3P51956 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.2□□□□□ -1.26
NEK3P51956 RNA5SP472-201ENST00000363868 119 ntBASIC7.2□□□□□ -1.26
NEK3P51956 RNU1-56P-201ENST00000391303 164 ntBASIC7.2□□□□□ -1.26
NEK3P51956 AL590762.1-201ENST00000391782 432 ntBASIC7.2□□□□□ -1.26
NEK3P51956 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC7.2□□□□□ -1.26
NEK3P51956 AL451061.1-201ENST00000407887 862 ntBASIC7.2□□□□□ -1.26
NEK3P51956 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NEK3P51956 TRIM60P17-201ENST00000415181 719 ntBASIC7.2□□□□□ -1.26
NEK3P51956 RPL17P17-201ENST00000419491 557 ntBASIC7.2□□□□□ -1.26
NEK3P51956 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC7.2□□□□□ -1.26
NEK3P51956 AC106901.1-201ENST00000425086 698 ntBASIC7.2□□□□□ -1.26
NEK3P51956 RPS10P14-201ENST00000440748 502 ntBASIC7.2□□□□□ -1.26
NEK3P51956 ST13P21-201ENST00000453250 1098 ntBASIC7.2□□□□□ -1.26
NEK3P51956 AL354872.1-201ENST00000456361 967 ntBASIC7.2□□□□□ -1.26
NEK3P51956 AC089999.1-201ENST00000460336 374 ntBASIC7.2□□□□□ -1.26
NEK3P51956 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.2□□□□□ -1.26
NEK3P51956 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NEK3P51956 AC126615.1-201ENST00000470084 630 ntBASIC7.2□□□□□ -1.26
NEK3P51956 AL591122.1-201ENST00000487348 492 ntBASIC7.2□□□□□ -1.26
NEK3P51956 RPS4XP23-201ENST00000487801 237 ntBASIC7.2□□□□□ -1.26
NEK3P51956 AC122714.1-201ENST00000502510 459 ntBASIC7.2□□□□□ -1.26
NEK3P51956 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC7.2□□□□□ -1.26
NEK3P51956 AC093325.1-201ENST00000508378 326 ntBASIC7.2□□□□□ -1.26
NEK3P51956 AC096754.1-201ENST00000508904 818 ntBASIC7.2□□□□□ -1.26
NEK3P51956 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC7.2□□□□□ -1.26
NEK3P51956 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC7.2□□□□□ -1.26
NEK3P51956 IGHVIII-11-1-201ENST00000522733 267 ntBASIC7.2□□□□□ -1.26
NEK3P51956 AC130366.1-201ENST00000526505 1192 ntBASIC7.2□□□□□ -1.26
NEK3P51956 LDHC-204ENST00000536880 957 ntTSL 5 BASIC7.2□□□□□ -1.26
NEK3P51956 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7.2□□□□□ -1.26
NEK3P51956 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.2□□□□□ -1.26
NEK3P51956 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.2□□□□□ -1.26
NEK3P51956 RN7SL426P-201ENST00000579106 295 ntBASIC7.2□□□□□ -1.26
NEK3P51956 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC7.2□□□□□ -1.26
NEK3P51956 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC7.2□□□□□ -1.26
NEK3P51956 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.2□□□□□ -1.26
NEK3P51956 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC7.2□□□□□ -1.26
NEK3P51956 AC139493.1-201ENST00000604368 397 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms