Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RPL5P16-201ENST00000471467 790 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 TRBV8-1-201ENST00000481590 279 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 AC025271.1-201ENST00000485045 429 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 AC066616.1-201ENST00000486795 413 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 BLNK-209ENST00000495266 440 ntTSL 5 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 AC027801.3-201ENST00000515049 698 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 AP004607.5-201ENST00000532034 217 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 PDCL3P1-201ENST00000534575 734 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 MTND2P17-201ENST00000550281 688 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 AL355333.1-201ENST00000605632 279 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 AL121782.1-201ENST00000611242 413 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 AL031777.2-201ENST00000611953 196 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 AL356752.1-201ENST00000615844 593 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 AL121985.3-201ENST00000620690 523 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 AC027506.1-201ENST00000621395 198 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 AC007347.2-201ENST00000623044 180 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 AC073857.1-201ENST00000625082 1054 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 AC183089.2-201ENST00000637931 916 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VMP1Q96GC9 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VMP1Q96GC9 MTCO1P7-201ENST00000419523 1542 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
VMP1Q96GC9 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VMP1Q96GC9 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VMP1Q96GC9 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
VMP1Q96GC9 AC007842.1-201ENST00000597336 2039 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VMP1Q96GC9 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
VMP1Q96GC9 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
VMP1Q96GC9 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
VMP1Q96GC9 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
VMP1Q96GC9 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
VMP1Q96GC9 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
VMP1Q96GC9 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
VMP1Q96GC9 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
VMP1Q96GC9 RNU12-2P-201ENST00000364789 156 ntBASIC6.68□□□□□ -1.34
VMP1Q96GC9 RNA5SP302-201ENST00000364896 100 ntBASIC6.68□□□□□ -1.34
VMP1Q96GC9 RN7SKP186-201ENST00000365371 303 ntBASIC6.68□□□□□ -1.34
VMP1Q96GC9 NRIR-201ENST00000366140 799 ntTSL 3 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 RPL12P1-201ENST00000374520 498 ntBASIC6.68□□□□□ -1.34
VMP1Q96GC9 SUMO2P13-201ENST00000403109 272 ntBASIC6.68□□□□□ -1.34
VMP1Q96GC9 AL662791.3-201ENST00000413771 776 ntBASIC6.68□□□□□ -1.34
VMP1Q96GC9 MTND4LP17-201ENST00000414607 293 ntBASIC6.68□□□□□ -1.34
VMP1Q96GC9 AL157698.1-201ENST00000415190 1011 ntBASIC6.68□□□□□ -1.34
VMP1Q96GC9 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
VMP1Q96GC9 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 UQCRHP1-204ENST00000424609 274 ntBASIC6.68□□□□□ -1.34
VMP1Q96GC9 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 RPS7P4-201ENST00000444127 582 ntBASIC6.68□□□□□ -1.34
VMP1Q96GC9 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 RN7SL456P-201ENST00000469290 295 ntBASIC6.68□□□□□ -1.34
VMP1Q96GC9 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 PGAM4P2-201ENST00000512491 721 ntBASIC6.68□□□□□ -1.34
VMP1Q96GC9 RNA5SP518-201ENST00000515957 119 ntBASIC6.68□□□□□ -1.34
VMP1Q96GC9 Vault.2-201ENST00000516519 98 ntBASIC6.68□□□□□ -1.34
VMP1Q96GC9 SCARNA18.2-201ENST00000516882 84 ntBASIC6.68□□□□□ -1.34
VMP1Q96GC9 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
VMP1Q96GC9 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
VMP1Q96GC9 AC096708.2-201ENST00000577676 512 ntBASIC6.68□□□□□ -1.34
VMP1Q96GC9 RN7SL42P-201ENST00000579786 294 ntBASIC6.68□□□□□ -1.34
VMP1Q96GC9 AC023513.1-201ENST00000604396 691 ntBASIC6.68□□□□□ -1.34
VMP1Q96GC9 AL008582.1-201ENST00000609612 442 ntBASIC6.68□□□□□ -1.34
VMP1Q96GC9 AC096586.2-201ENST00000610260 441 ntBASIC6.68□□□□□ -1.34
VMP1Q96GC9 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 MAPK10-350ENST00000641777 965 ntBASIC6.68□□□□□ -1.34
VMP1Q96GC9 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
VMP1Q96GC9 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
VMP1Q96GC9 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
VMP1Q96GC9 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms