Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.16□□□□□ -1.42
APOBEC1P41238 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
APOBEC1P41238 AC090774.2-201ENST00000584708 322 ntBASIC6.16□□□□□ -1.42
APOBEC1P41238 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.16□□□□□ -1.42
APOBEC1P41238 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.16□□□□□ -1.42
APOBEC1P41238 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.16□□□□□ -1.42
APOBEC1P41238 AL078624.2-201ENST00000605063 554 ntBASIC6.16□□□□□ -1.42
APOBEC1P41238 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.16□□□□□ -1.42
APOBEC1P41238 AP002345.2-201ENST00000609961 904 ntBASIC6.16□□□□□ -1.42
APOBEC1P41238 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.16□□□□□ -1.42
APOBEC1P41238 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.16□□□□□ -1.42
APOBEC1P41238 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.16□□□□□ -1.42
APOBEC1P41238 AF117829.2-201ENST00000619538 361 ntBASIC6.16□□□□□ -1.42
APOBEC1P41238 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC6.16□□□□□ -1.42
APOBEC1P41238 AC005355.2-201ENST00000625064 484 ntBASIC6.16□□□□□ -1.42
APOBEC1P41238 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.16□□□□□ -1.42
APOBEC1P41238 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
APOBEC1P41238 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
APOBEC1P41238 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.16□□□□□ -1.42
APOBEC1P41238 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
APOBEC1P41238 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
APOBEC1P41238 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.16□□□□□ -1.42
APOBEC1P41238 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
APOBEC1P41238 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.16□□□□□ -1.42
APOBEC1P41238 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.16□□□□□ -1.42
APOBEC1P41238 LPAL2-203ENST00000454031 2498 ntBASIC6.16□□□□□ -1.42
APOBEC1P41238 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.16□□□□□ -1.42
APOBEC1P41238 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.16□□□□□ -1.42
APOBEC1P41238 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
APOBEC1P41238 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.15□□□□□ -1.42
APOBEC1P41238 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
APOBEC1P41238 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
APOBEC1P41238 AC083806.2-201ENST00000617795 2685 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
APOBEC1P41238 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.15□□□□□ -1.42
APOBEC1P41238 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.15□□□□□ -1.42
APOBEC1P41238 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
APOBEC1P41238 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
APOBEC1P41238 AL359195.2-201ENST00000623657 4412 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.15□□□□□ -1.42
APOBEC1P41238 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
APOBEC1P41238 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
APOBEC1P41238 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
APOBEC1P41238 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
APOBEC1P41238 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
APOBEC1P41238 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
APOBEC1P41238 MAPK10-383ENST00000642032 3390 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
APOBEC1P41238 RPL24P4-201ENST00000326586 421 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
APOBEC1P41238 MIR27A-201ENST00000385073 78 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 RNA5SP474-201ENST00000391234 90 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 LDHAP5-201ENST00000394996 622 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 RNA5SP231-201ENST00000410496 138 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.15□□□□□ -1.42
APOBEC1P41238 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.15□□□□□ -1.42
APOBEC1P41238 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.15□□□□□ -1.42
APOBEC1P41238 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.15□□□□□ -1.42
APOBEC1P41238 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 AC245452.2-201ENST00000435222 392 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.15□□□□□ -1.42
APOBEC1P41238 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.15□□□□□ -1.42
APOBEC1P41238 RPL7AP71-201ENST00000451120 739 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 AC026254.2-201ENST00000475295 371 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.15□□□□□ -1.42
APOBEC1P41238 AC017007.1-201ENST00000511960 415 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 RN7SKP98-201ENST00000517070 156 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.15□□□□□ -1.42
APOBEC1P41238 AC087752.2-201ENST00000521219 281 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.15□□□□□ -1.42
APOBEC1P41238 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
APOBEC1P41238 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
APOBEC1P41238 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.15□□□□□ -1.42
APOBEC1P41238 RN7SL270P-201ENST00000579643 281 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 CTSLP2-201ENST00000580501 394 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.15□□□□□ -1.42
APOBEC1P41238 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.15□□□□□ -1.42
APOBEC1P41238 AL590032.1-201ENST00000604920 252 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.15□□□□□ -1.42
APOBEC1P41238 OR1N1-202ENST00000619659 939 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 AC106782.7-201ENST00000624024 418 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 AC133555.5-201ENST00000624430 418 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.15□□□□□ -1.42
APOBEC1P41238 SNORA16A-202ENST00000628458 135 ntBASIC6.15□□□□□ -1.42
APOBEC1P41238 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.15□□□□□ -1.42
APOBEC1P41238 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
APOBEC1P41238 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
APOBEC1P41238 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
APOBEC1P41238 CLCA3P-203ENST00000490028 2781 ntBASIC6.15□□□□□ -1.43
APOBEC1P41238 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
APOBEC1P41238 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
APOBEC1P41238 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
APOBEC1P41238 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
APOBEC1P41238 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.14□□□□□ -1.43
APOBEC1P41238 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
APOBEC1P41238 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
APOBEC1P41238 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
APOBEC1P41238 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.14□□□□□ -1.43
APOBEC1P41238 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms