Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.73□□□□□ -1.33
CDH3P22223 RPS26P11-201ENST00000463445 348 ntBASIC6.73□□□□□ -1.33
CDH3P22223 RPS26P6-201ENST00000475156 348 ntBASIC6.73□□□□□ -1.33
CDH3P22223 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.73□□□□□ -1.33
CDH3P22223 AC095057.1-201ENST00000507583 168 ntBASIC6.73□□□□□ -1.33
CDH3P22223 AC106800.2-201ENST00000514009 1103 ntBASIC6.73□□□□□ -1.33
CDH3P22223 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.73□□□□□ -1.33
CDH3P22223 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.73□□□□□ -1.33
CDH3P22223 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CDH3P22223 AP002004.1-206ENST00000532441 876 ntBASIC6.73□□□□□ -1.33
CDH3P22223 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.73□□□□□ -1.33
CDH3P22223 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.73□□□□□ -1.33
CDH3P22223 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.73□□□□□ -1.33
CDH3P22223 AC023827.2-201ENST00000566880 1061 ntBASIC6.73□□□□□ -1.33
CDH3P22223 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.73□□□□□ -1.33
CDH3P22223 AC068408.1-201ENST00000577406 1144 ntBASIC6.73□□□□□ -1.33
CDH3P22223 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.73□□□□□ -1.33
CDH3P22223 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.73□□□□□ -1.33
CDH3P22223 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.73□□□□□ -1.33
CDH3P22223 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.73□□□□□ -1.33
CDH3P22223 AC004943.1-203ENST00000624370 1074 ntBASIC6.73□□□□□ -1.33
CDH3P22223 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.73□□□□□ -1.33
CDH3P22223 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.73□□□□□ -1.33
CDH3P22223 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.73□□□□□ -1.33
CDH3P22223 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
CDH3P22223 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.73□□□□□ -1.33
CDH3P22223 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
CDH3P22223 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CDH3P22223 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CDH3P22223 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CDH3P22223 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CDH3P22223 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDH3P22223 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
CDH3P22223 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDH3P22223 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDH3P22223 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.72□□□□□ -1.33
CDH3P22223 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDH3P22223 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDH3P22223 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDH3P22223 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDH3P22223 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CDH3P22223 AL590762.1-201ENST00000391782 432 ntBASIC6.72□□□□□ -1.33
CDH3P22223 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.72□□□□□ -1.33
CDH3P22223 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.72□□□□□ -1.33
CDH3P22223 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.72□□□□□ -1.33
CDH3P22223 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.72□□□□□ -1.33
CDH3P22223 RPL3P11-201ENST00000434028 1146 ntBASIC6.72□□□□□ -1.33
CDH3P22223 OR51P1P-201ENST00000447547 942 ntBASIC6.72□□□□□ -1.33
CDH3P22223 AL096803.1-201ENST00000456921 1021 ntBASIC6.72□□□□□ -1.33
CDH3P22223 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDH3P22223 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.72□□□□□ -1.33
CDH3P22223 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CDH3P22223 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.72□□□□□ -1.33
CDH3P22223 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.72□□□□□ -1.33
CDH3P22223 HMGN1P26-201ENST00000558737 303 ntBASIC6.72□□□□□ -1.33
CDH3P22223 AL132640.1-201ENST00000559594 619 ntBASIC6.72□□□□□ -1.33
CDH3P22223 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.72□□□□□ -1.33
CDH3P22223 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.72□□□□□ -1.33
CDH3P22223 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.72□□□□□ -1.33
CDH3P22223 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.72□□□□□ -1.33
CDH3P22223 MIR4312-201ENST00000579909 76 ntBASIC6.72□□□□□ -1.33
CDH3P22223 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.72□□□□□ -1.33
CDH3P22223 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.72□□□□□ -1.33
CDH3P22223 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.72□□□□□ -1.33
CDH3P22223 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.72□□□□□ -1.33
CDH3P22223 AC005899.7-201ENST00000618199 588 ntBASIC6.72□□□□□ -1.33
CDH3P22223 AP005212.3-201ENST00000619964 528 ntBASIC6.72□□□□□ -1.33
CDH3P22223 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.72□□□□□ -1.33
CDH3P22223 AC106782.7-201ENST00000624024 418 ntBASIC6.72□□□□□ -1.33
CDH3P22223 AC133555.5-201ENST00000624430 418 ntBASIC6.72□□□□□ -1.33
CDH3P22223 AC135068.11-201ENST00000636378 921 ntBASIC6.72□□□□□ -1.33
CDH3P22223 AC011471.4-201ENST00000638271 216 ntBASIC6.72□□□□□ -1.33
CDH3P22223 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.72□□□□□ -1.33
CDH3P22223 MTND5P12-201ENST00000502851 1449 ntBASIC6.72□□□□□ -1.33
CDH3P22223 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.72□□□□□ -1.33
CDH3P22223 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDH3P22223 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDH3P22223 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.72□□□□□ -1.33
CDH3P22223 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDH3P22223 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDH3P22223 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CDH3P22223 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.72□□□□□ -1.33
CDH3P22223 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDH3P22223 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.72□□□□□ -1.33
CDH3P22223 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CDH3P22223 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDH3P22223 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CDH3P22223 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CDH3P22223 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.71□□□□□ -1.33
CDH3P22223 AKAP17BP-201ENST00000431706 2719 ntBASIC6.71□□□□□ -1.33
CDH3P22223 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.71□□□□□ -1.33
CDH3P22223 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.71□□□□□ -1.33
CDH3P22223 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.71□□□□□ -1.33
CDH3P22223 AL121949.2-201ENST00000403446 1548 ntBASIC6.71□□□□□ -1.33
CDH3P22223 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDH3P22223 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDH3P22223 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.71□□□□□ -1.34
CDH3P22223 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDH3P22223 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDH3P22223 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms