Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.29
PCDH9Q9HC56 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
PCDH9Q9HC56 AC107980.1-201ENST00000558671 3355 ntBASIC6.96□□□□□ -1.29
PCDH9Q9HC56 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
PCDH9Q9HC56 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
PCDH9Q9HC56 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 MIR138-2-201ENST00000384916 84 ntBASIC6.96□□□□□ -1.3
PCDH9Q9HC56 MIR187-201ENST00000385062 109 ntBASIC6.96□□□□□ -1.3
PCDH9Q9HC56 EEF1GP6-201ENST00000402309 905 ntBASIC6.96□□□□□ -1.3
PCDH9Q9HC56 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 RPS26P11-201ENST00000463445 348 ntBASIC6.96□□□□□ -1.3
PCDH9Q9HC56 RPS26P6-201ENST00000475156 348 ntBASIC6.96□□□□□ -1.3
PCDH9Q9HC56 AC021146.11-201ENST00000503319 491 ntBASIC6.96□□□□□ -1.3
PCDH9Q9HC56 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 RBMS2P1-201ENST00000525031 1226 ntBASIC6.96□□□□□ -1.3
PCDH9Q9HC56 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 AC023080.1-201ENST00000551663 931 ntBASIC6.96□□□□□ -1.3
PCDH9Q9HC56 MIR378H-201ENST00000579966 83 ntBASIC6.96□□□□□ -1.3
PCDH9Q9HC56 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.96□□□□□ -1.3
PCDH9Q9HC56 AP000577.1-201ENST00000624366 878 ntBASIC6.96□□□□□ -1.3
PCDH9Q9HC56 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
PCDH9Q9HC56 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 TNPO1P2-201ENST00000426249 2665 ntBASIC6.95□□□□□ -1.3
PCDH9Q9HC56 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.95□□□□□ -1.3
PCDH9Q9HC56 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 OR10D1P-201ENST00000355343 936 ntBASIC6.95□□□□□ -1.3
PCDH9Q9HC56 RNA5SP176-201ENST00000390956 110 ntBASIC6.95□□□□□ -1.3
PCDH9Q9HC56 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 AC091492.1-201ENST00000419844 272 ntBASIC6.95□□□□□ -1.3
PCDH9Q9HC56 YWHAZP5-201ENST00000419975 730 ntBASIC6.95□□□□□ -1.3
PCDH9Q9HC56 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.95□□□□□ -1.3
PCDH9Q9HC56 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 AL451136.1-201ENST00000435399 325 ntBASIC6.95□□□□□ -1.3
PCDH9Q9HC56 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 RN7SL492P-201ENST00000460700 295 ntBASIC6.95□□□□□ -1.3
PCDH9Q9HC56 H3F3AP3-201ENST00000497682 407 ntBASIC6.95□□□□□ -1.3
PCDH9Q9HC56 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 RNA5SP278-201ENST00000517055 102 ntBASIC6.95□□□□□ -1.3
PCDH9Q9HC56 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 SLC25A51P2-201ENST00000535708 889 ntBASIC6.95□□□□□ -1.3
PCDH9Q9HC56 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 RPS27AP19-201ENST00000597285 458 ntBASIC6.95□□□□□ -1.3
PCDH9Q9HC56 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 AL078624.2-201ENST00000605063 554 ntBASIC6.95□□□□□ -1.3
PCDH9Q9HC56 AC016252.1-201ENST00000609721 474 ntBASIC6.95□□□□□ -1.3
PCDH9Q9HC56 PCA3_2.1-201ENST00000612507 409 ntBASIC6.95□□□□□ -1.3
PCDH9Q9HC56 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 AC009950.2-201ENST00000636548 183 ntBASIC6.95□□□□□ -1.3
PCDH9Q9HC56 Z93929.1-201ENST00000418200 1475 ntBASIC6.95□□□□□ -1.3
PCDH9Q9HC56 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
PCDH9Q9HC56 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms