Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC28BQ9BUN5 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC28BQ9BUN5 AC005332.9-201ENST00000620266 2921 ntBASIC6.55□□□□□ -1.36
CCDC28BQ9BUN5 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.55□□□□□ -1.36
CCDC28BQ9BUN5 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC28BQ9BUN5 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC28BQ9BUN5 AC232271.1-201ENST00000602455 2715 ntBASIC6.55□□□□□ -1.36
CCDC28BQ9BUN5 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC28BQ9BUN5 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC28BQ9BUN5 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 SNORA70.3-201ENST00000365075 132 ntBASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 LCN1P2-201ENST00000372030 223 ntBASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 AC090114.1-201ENST00000393266 448 ntBASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 FAUP2-201ENST00000394301 401 ntBASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 AL034372.1-201ENST00000407586 754 ntBASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 AC116036.1-201ENST00000412199 367 ntBASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 AL663061.1-201ENST00000416625 580 ntBASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 OR5W1P-201ENST00000423705 938 ntBASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 RPL7AP14-201ENST00000424041 802 ntBASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 AC239367.3-201ENST00000428996 814 ntBASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 HIST1H2APS6-201ENST00000448609 364 ntBASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 RN7SL213P-201ENST00000463482 317 ntBASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 RPS2P25-201ENST00000467247 580 ntBASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 OR51A1P-201ENST00000511110 946 ntBASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 AC016559.1-201ENST00000511420 199 ntBASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 AC100854.1-201ENST00000520351 341 ntBASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 AP003084.1-201ENST00000524828 742 ntBASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 AC106785.4-201ENST00000569492 412 ntBASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 AC087894.3-201ENST00000623682 349 ntBASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 FGL2-202ENST00000637771 989 ntBASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 AC093844.1-201ENST00000514910 1361 ntBASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC28BQ9BUN5 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 RN7SKP55-201ENST00000364888 307 ntBASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 AL645936.2-201ENST00000430565 928 ntBASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 MGAT2P1-201ENST00000449718 797 ntBASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 MEF2AP1-201ENST00000454867 863 ntBASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 RPL23AP68-201ENST00000480924 445 ntBASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 RPL34P29-201ENST00000491411 325 ntBASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms