Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC090539.2-201ENST00000523425 671 ntBASIC5.12□□□□□ -1.59
CXCL1P09341 RRM1-AS1-201ENST00000529323 346 ntTSL 5 BASIC5.12□□□□□ -1.59
CXCL1P09341 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL1P09341 ATP5J2P4-201ENST00000538774 267 ntBASIC5.12□□□□□ -1.59
CXCL1P09341 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CXCL1P09341 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL1P09341 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CXCL1P09341 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL1P09341 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC5.12□□□□□ -1.59
CXCL1P09341 RN7SL155P-201ENST00000581538 263 ntBASIC5.12□□□□□ -1.59
CXCL1P09341 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.12□□□□□ -1.59
CXCL1P09341 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC5.12□□□□□ -1.59
CXCL1P09341 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC5.12□□□□□ -1.59
CXCL1P09341 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.12□□□□□ -1.59
CXCL1P09341 AC024589.2-201ENST00000605642 1294 ntBASIC5.12□□□□□ -1.59
CXCL1P09341 BX005195.1-201ENST00000618097 1198 ntBASIC5.12□□□□□ -1.59
CXCL1P09341 AC078909.2-201ENST00000620584 398 ntBASIC5.12□□□□□ -1.59
CXCL1P09341 AC079456.1-201ENST00000624010 480 ntBASIC5.12□□□□□ -1.59
CXCL1P09341 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC5.12□□□□□ -1.59
CXCL1P09341 AC063952.1-203ENST00000634410 658 ntBASIC5.12□□□□□ -1.59
CXCL1P09341 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.12□□□□□ -1.59
CXCL1P09341 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CXCL1P09341 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL1P09341 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL1P09341 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL1P09341 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL1P09341 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CXCL1P09341 AP000473.2-201ENST00000602659 1537 ntBASIC5.12□□□□□ -1.59
CXCL1P09341 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.12□□□□□ -1.59
CXCL1P09341 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.12□□□□□ -1.59
CXCL1P09341 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CXCL1P09341 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL1P09341 AC129502.1-201ENST00000623261 1654 ntBASIC5.12□□□□□ -1.59
CXCL1P09341 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CXCL1P09341 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CXCL1P09341 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CXCL1P09341 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.11□□□□□ -1.59
CXCL1P09341 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL1P09341 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL1P09341 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.11□□□□□ -1.59
CXCL1P09341 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL1P09341 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL1P09341 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL1P09341 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.11□□□□□ -1.59
CXCL1P09341 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.11□□□□□ -1.59
CXCL1P09341 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL1P09341 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL1P09341 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CXCL1P09341 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL1P09341 AL390039.1-201ENST00000399148 611 ntBASIC5.11□□□□□ -1.59
CXCL1P09341 RN7SKP168-201ENST00000410910 300 ntBASIC5.11□□□□□ -1.59
CXCL1P09341 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC5.11□□□□□ -1.59
CXCL1P09341 AC009506.2-201ENST00000420635 840 ntBASIC5.11□□□□□ -1.59
CXCL1P09341 HCG25-217ENST00000422366 702 ntTSL 3 BASIC5.11□□□□□ -1.59
CXCL1P09341 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5.11□□□□□ -1.59
CXCL1P09341 APCDD1L-AS1-204ENST00000427794 461 ntTSL 3 BASIC5.11□□□□□ -1.59
CXCL1P09341 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC5.11□□□□□ -1.59
CXCL1P09341 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.11□□□□□ -1.59
CXCL1P09341 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CXCL1P09341 CYP2C56P-201ENST00000440076 291 ntBASIC5.11□□□□□ -1.59
CXCL1P09341 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.11□□□□□ -1.59
CXCL1P09341 AC009237.4-201ENST00000441078 238 ntBASIC5.11□□□□□ -1.59
CXCL1P09341 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC5.11□□□□□ -1.59
CXCL1P09341 MGAT2P1-201ENST00000449718 797 ntBASIC5.11□□□□□ -1.59
CXCL1P09341 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CXCL1P09341 AC236972.4-201ENST00000458091 963 ntBASIC5.11□□□□□ -1.59
CXCL1P09341 RN7SL368P-201ENST00000473384 277 ntBASIC5.11□□□□□ -1.59
CXCL1P09341 AC079944.1-201ENST00000485426 495 ntBASIC5.11□□□□□ -1.59
CXCL1P09341 RN7SL239P-201ENST00000490061 300 ntBASIC5.11□□□□□ -1.59
CXCL1P09341 AC127024.1-201ENST00000490847 418 ntBASIC5.11□□□□□ -1.59
CXCL1P09341 RN7SL284P-201ENST00000498823 275 ntBASIC5.11□□□□□ -1.59
CXCL1P09341 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC5.11□□□□□ -1.59
CXCL1P09341 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC5.11□□□□□ -1.59
CXCL1P09341 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC5.11□□□□□ -1.59
CXCL1P09341 IGHV1-14-201ENST00000523391 241 ntBASIC5.11□□□□□ -1.59
CXCL1P09341 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CXCL1P09341 USP2-AS1-203ENST00000530002 764 ntTSL 3 BASIC5.11□□□□□ -1.59
CXCL1P09341 AC073916.1-201ENST00000545095 130 ntBASIC5.11□□□□□ -1.59
CXCL1P09341 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.11□□□□□ -1.59
CXCL1P09341 NDUFA3P4-201ENST00000560814 250 ntBASIC5.11□□□□□ -1.59
CXCL1P09341 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC5.11□□□□□ -1.59
CXCL1P09341 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.11□□□□□ -1.59
CXCL1P09341 AP001357.1-201ENST00000586304 1053 ntBASIC5.11□□□□□ -1.59
CXCL1P09341 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.11□□□□□ -1.59
CXCL1P09341 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC5.11□□□□□ -1.59
CXCL1P09341 AC007255.2-201ENST00000604053 631 ntBASIC5.11□□□□□ -1.59
CXCL1P09341 AC135050.6-202ENST00000613584 392 ntBASIC5.11□□□□□ -1.59
CXCL1P09341 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC5.11□□□□□ -1.59
CXCL1P09341 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL1P09341 RNA5SP439-201ENST00000617595 124 ntBASIC5.11□□□□□ -1.59
CXCL1P09341 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC5.11□□□□□ -1.59
CXCL1P09341 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC5.11□□□□□ -1.59
CXCL1P09341 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC5.11□□□□□ -1.59
CXCL1P09341 AL139254.2-202ENST00000641937 1156 ntBASIC5.11□□□□□ -1.59
CXCL1P09341 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL1P09341 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CXCL1P09341 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC5.11□□□□□ -1.59
CXCL1P09341 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CXCL1P09341 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.11□□□□□ -1.59
CXCL1P09341 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms