Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 AL355032.1-201ENST00000472981 438 ntBASIC5.75□□□□□ -1.49
HLA-DQB1P01920 RN7SL849P-201ENST00000485236 295 ntBASIC5.75□□□□□ -1.49
HLA-DQB1P01920 RN7SL187P-201ENST00000495587 303 ntBASIC5.75□□□□□ -1.49
HLA-DQB1P01920 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 AC106774.2-201ENST00000510266 406 ntBASIC5.75□□□□□ -1.49
HLA-DQB1P01920 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 AC117383.2-201ENST00000514722 322 ntBASIC5.75□□□□□ -1.49
HLA-DQB1P01920 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 OR7E1P-201ENST00000533891 958 ntBASIC5.75□□□□□ -1.49
HLA-DQB1P01920 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 AC007537.1-201ENST00000539347 327 ntBASIC5.75□□□□□ -1.49
HLA-DQB1P01920 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 EIF4A3P1-201ENST00000578499 647 ntBASIC5.75□□□□□ -1.49
HLA-DQB1P01920 RN7SL25P-201ENST00000583862 260 ntBASIC5.75□□□□□ -1.49
HLA-DQB1P01920 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 AC007262.1-201ENST00000604099 321 ntBASIC5.75□□□□□ -1.49
HLA-DQB1P01920 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 NLRP3P1-201ENST00000622303 1785 ntBASIC5.75□□□□□ -1.49
HLA-DQB1P01920 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HLA-DQB1P01920 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 AC011455.2-201ENST00000599320 3336 ntBASIC5.74□□□□□ -1.49
HLA-DQB1P01920 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 U3.1-201ENST00000362500 215 ntBASIC5.74□□□□□ -1.49
HLA-DQB1P01920 SNORA70.3-201ENST00000365075 132 ntBASIC5.74□□□□□ -1.49
HLA-DQB1P01920 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 PCNAP3-201ENST00000397222 778 ntBASIC5.74□□□□□ -1.49
HLA-DQB1P01920 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 HIST1H2APS6-201ENST00000448609 364 ntBASIC5.74□□□□□ -1.49
HLA-DQB1P01920 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 CHCHD2P7-201ENST00000508008 452 ntBASIC5.74□□□□□ -1.49
HLA-DQB1P01920 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 OXR1-212ENST00000521592 993 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 AP001267.4-201ENST00000602598 545 ntBASIC5.74□□□□□ -1.49
HLA-DQB1P01920 AC004908.1-201ENST00000606572 541 ntBASIC5.74□□□□□ -1.49
HLA-DQB1P01920 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC5.74□□□□□ -1.49
HLA-DQB1P01920 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 AL033543.1-201ENST00000623440 13454 ntBASIC5.74□□□□□ -1.49
HLA-DQB1P01920 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HLA-DQB1P01920 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms