Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC015799.1-201ENST00000622996 3122 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 SEPT7P2-202ENST00000398921 823 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 LSM5-202ENST00000409292 538 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AL604028.2-201ENST00000437848 788 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AC007790.1-201ENST00000439081 782 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AC108039.2-201ENST00000440214 359 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 snoU13.29-201ENST00000459370 104 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 RPL34P34-201ENST00000465389 354 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 SLC25A51P1-201ENST00000468432 871 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 RN7SL392P-201ENST00000473024 299 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 CR383656.1-201ENST00000484916 377 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AC083906.1-201ENST00000509298 406 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 OR7E2P-201ENST00000533071 889 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 DNM1P31-201ENST00000564149 696 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 EEF1B2P1-201ENST00000567221 672 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 RN7SL786P-201ENST00000579130 298 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AP000436.1-201ENST00000605239 800 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AC024589.2-201ENST00000605642 1294 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AC012488.1-201ENST00000611221 640 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AC016582.3-206ENST00000636547 207 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 MFSD8-256ENST00000641949 1640 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.61
HLA-DQA1P01909 WDR95P-201ENST00000425638 1542 ntBASIC5.02□□□□□ -1.61
HLA-DQA1P01909 AC025470.1-201ENST00000510053 2032 ntBASIC5.02□□□□□ -1.61
HLA-DQA1P01909 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.02□□□□□ -1.61
HLA-DQA1P01909 AL353763.1-201ENST00000624467 1628 ntBASIC5.02□□□□□ -1.61
HLA-DQA1P01909 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 AL138847.1-201ENST00000258651 546 ntBASIC5.02□□□□□ -1.61
HLA-DQA1P01909 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 PTMAP8-201ENST00000397729 342 ntBASIC5.02□□□□□ -1.61
HLA-DQA1P01909 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 HBBP1-201ENST00000433329 439 ntBASIC5.02□□□□□ -1.61
HLA-DQA1P01909 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 RPS18P13-201ENST00000461260 454 ntBASIC5.02□□□□□ -1.61
HLA-DQA1P01909 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 AC079944.1-201ENST00000485426 495 ntBASIC5.02□□□□□ -1.61
HLA-DQA1P01909 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 IGLV10-67-201ENST00000519446 325 ntBASIC5.02□□□□□ -1.61
HLA-DQA1P01909 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.02□□□□□ -1.61
HLA-DQA1P01909 RN7SL697P-201ENST00000582484 299 ntBASIC5.02□□□□□ -1.61
HLA-DQA1P01909 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms