Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
SSX4O60224 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSX4O60224 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSX4O60224 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
SSX4O60224 AL121949.2-201ENST00000403446 1548 ntBASIC6.25□□□□□ -1.41
SSX4O60224 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSX4O60224 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SSX4O60224 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
SSX4O60224 AL512353.3-201ENST00000417517 1326 ntBASIC6.25□□□□□ -1.41
SSX4O60224 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SSX4O60224 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSX4O60224 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSX4O60224 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SSX4O60224 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
SSX4O60224 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSX4O60224 AC126474.2-201ENST00000623268 1750 ntBASIC6.24□□□□□ -1.41
SSX4O60224 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSX4O60224 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSX4O60224 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSX4O60224 FO082842.1-201ENST00000423552 1370 ntBASIC6.24□□□□□ -1.41
SSX4O60224 AC007342.9-201ENST00000623877 1385 ntBASIC6.24□□□□□ -1.41
SSX4O60224 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SSX4O60224 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSX4O60224 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSX4O60224 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
SSX4O60224 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSX4O60224 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSX4O60224 FUNDC2P3-201ENST00000334716 533 ntBASIC6.24□□□□□ -1.41
SSX4O60224 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SSX4O60224 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.24□□□□□ -1.41
SSX4O60224 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.24□□□□□ -1.41
SSX4O60224 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.24□□□□□ -1.41
SSX4O60224 NPM1P25-201ENST00000429734 854 ntBASIC6.24□□□□□ -1.41
SSX4O60224 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.24□□□□□ -1.41
SSX4O60224 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.24□□□□□ -1.41
SSX4O60224 AC009244.1-201ENST00000450566 258 ntBASIC6.24□□□□□ -1.41
SSX4O60224 AC093799.1-201ENST00000452411 499 ntBASIC6.24□□□□□ -1.41
SSX4O60224 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.24□□□□□ -1.41
SSX4O60224 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SSX4O60224 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.24□□□□□ -1.41
SSX4O60224 RN7SL612P-201ENST00000497704 295 ntBASIC6.24□□□□□ -1.41
SSX4O60224 NPY6R-201ENST00000503807 1112 ntBASIC6.24□□□□□ -1.41
SSX4O60224 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC6.24□□□□□ -1.41
SSX4O60224 RPL7L1P7-201ENST00000509986 724 ntBASIC6.24□□□□□ -1.41
SSX4O60224 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.24□□□□□ -1.41
SSX4O60224 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.24□□□□□ -1.41
SSX4O60224 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC6.24□□□□□ -1.41
SSX4O60224 AC130366.1-201ENST00000526505 1192 ntBASIC6.24□□□□□ -1.41
SSX4O60224 AP000662.1-201ENST00000530952 487 ntBASIC6.24□□□□□ -1.41
SSX4O60224 OR7E161P-201ENST00000533722 967 ntBASIC6.24□□□□□ -1.41
SSX4O60224 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.24□□□□□ -1.41
SSX4O60224 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.24□□□□□ -1.41
SSX4O60224 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.24□□□□□ -1.41
SSX4O60224 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC6.24□□□□□ -1.41
SSX4O60224 AC091932.1-201ENST00000569381 427 ntBASIC6.24□□□□□ -1.41
SSX4O60224 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.24□□□□□ -1.41
SSX4O60224 MIR4301-201ENST00000577203 66 ntBASIC6.24□□□□□ -1.41
SSX4O60224 AC010615.3-201ENST00000597319 394 ntBASIC6.24□□□□□ -1.41
SSX4O60224 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSX4O60224 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.24□□□□□ -1.41
SSX4O60224 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.24□□□□□ -1.41
SSX4O60224 AC135068.11-201ENST00000636378 921 ntBASIC6.24□□□□□ -1.41
SSX4O60224 AC132825.8-201ENST00000640783 297 ntBASIC6.24□□□□□ -1.41
SSX4O60224 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.24□□□□□ -1.41
SSX4O60224 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSX4O60224 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC6.24□□□□□ -1.41
SSX4O60224 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSX4O60224 AC009135.2-201ENST00000624136 1768 ntBASIC6.23□□□□□ -1.41
SSX4O60224 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSX4O60224 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSX4O60224 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
SSX4O60224 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSX4O60224 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.23□□□□□ -1.41
SSX4O60224 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSX4O60224 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
SSX4O60224 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.23□□□□□ -1.41
SSX4O60224 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.23□□□□□ -1.41
SSX4O60224 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
SSX4O60224 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SSX4O60224 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SSX4O60224 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.23□□□□□ -1.41
SSX4O60224 AC017035.1-201ENST00000411999 1115 ntBASIC6.23□□□□□ -1.41
SSX4O60224 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC6.23□□□□□ -1.41
SSX4O60224 AC134879.1-201ENST00000426062 394 ntBASIC6.23□□□□□ -1.41
SSX4O60224 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC6.23□□□□□ -1.41
SSX4O60224 ST13P21-201ENST00000453250 1098 ntBASIC6.23□□□□□ -1.41
SSX4O60224 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.23□□□□□ -1.41
SSX4O60224 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
SSX4O60224 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
SSX4O60224 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC6.23□□□□□ -1.41
SSX4O60224 SUMO2P19-201ENST00000518920 295 ntBASIC6.23□□□□□ -1.41
SSX4O60224 IGKV2-29-201ENST00000521304 372 ntBASIC6.23□□□□□ -1.41
SSX4O60224 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.23□□□□□ -1.41
SSX4O60224 RBMS2P1-201ENST00000525031 1226 ntBASIC6.23□□□□□ -1.41
SSX4O60224 OR6M3P-201ENST00000531567 700 ntBASIC6.23□□□□□ -1.41
SSX4O60224 AC091304.4-201ENST00000565703 620 ntBASIC6.23□□□□□ -1.41
SSX4O60224 RPS7P1-201ENST00000571702 585 ntBASIC6.23□□□□□ -1.41
SSX4O60224 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.23□□□□□ -1.41
SSX4O60224 AC113361.1-201ENST00000606683 543 ntBASIC6.23□□□□□ -1.41
SSX4O60224 uc_338.21-201ENST00000622458 147 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms