Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 YGL007C-AYGL007C-A 87 nt-2.47□□□□□ -2.8
ATG40Q99325 YDL159W-AYDL159W-A 132 nt-2.48□□□□□ -2.81
ATG40Q99325 snR62snR62 100 nt-2.51□□□□□ -2.81
ATG40Q99325 YGR122C-AYGR122C-A 129 nt-2.51□□□□□ -2.81
ATG40Q99325 YNL170WYNL170W 396 nt-2.58□□□□□ -2.82
ATG40Q99325 snR64snR64 101 nt-2.64□□□□□ -2.83
ATG40Q99325 YDR543CYDR543C 300 nt-2.66□□□□□ -2.84
ATG40Q99325 YLR294CYLR294C 330 nt-2.76□□□□□ -2.85
ATG40Q99325 YDR524C-AYDR524C-A 120 nt-2.79□□□□□ -2.86
ATG40Q99325 YKL096C-BYKL096C-B 150 nt-2.84□□□□□ -2.86
ATG40Q99325 YOL166W-AYOL166W-A 156 nt-2.86□□□□□ -2.87
ATG40Q99325 YOR225WYOR225W 330 nt-2.87□□□□□ -2.87
ATG40Q99325 snR87snR87 109 nt-3□□□□□ -2.89
ATG40Q99325 ATP8Q0080 147 nt-3.03□□□□□ -2.89
ATG40Q99325 YLL066W-BYLL066W-B 171 nt-3.12□□□□□ -2.91
ATG40Q99325 snR58snR58 96 nt-3.14□□□□□ -2.91
ATG40Q99325 YMR326CYMR326C 309 nt-3.15□□□□□ -2.91
ATG40Q99325 YHR217CYHR217C 462 nt-3.17□□□□□ -2.92
ATG40Q99325 snR53snR53 91 nt-3.17□□□□□ -2.92
ATG40Q99325 Q0143Q0143 153 nt-3.18□□□□□ -2.92
ATG40Q99325 YLR149C-AYLR149C-A 87 nt-3.24□□□□□ -2.93
ATG40Q99325 snR40snR40 97 nt-3.39□□□□□ -2.95
ATG40Q99325 Q0092Q0092 141 nt-3.51□□□□□ -2.97
ATG40Q99325 YBL109WYBL109W 336 nt-3.51□□□□□ -2.97
ATG40Q99325 tC(GCA)QtC(GCA)Q 76 nt-3.53□□□□□ -2.97
ATG40Q99325 YJR162CYJR162C 351 nt-3.79□□□□□ -3.02
ATG40Q99325 YDL247W-AYDL247W-A 75 nt-3.8□□□□□ -3.02
ATG40Q99325 YJL136W-AYJL136W-A 84 nt-4.25□□□□□ -3.09
ATG40Q99325 snR75snR75 89 nt-4.53□□□□□ -3.13
Retrieved 29 of 7,029 protein–RNA pairs in 3.5 ms