Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TraipQ8VIG6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TraipQ8VIG6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TraipQ8VIG6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TraipQ8VIG6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TraipQ8VIG6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TraipQ8VIG6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TraipQ8VIG6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TraipQ8VIG6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.25■□□□□ 0.51
TraipQ8VIG6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.25■□□□□ 0.51
TraipQ8VIG6 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.25■□□□□ 0.51
TraipQ8VIG6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TraipQ8VIG6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TraipQ8VIG6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TraipQ8VIG6 Gm10819-201ENSMUST00000099988 561 ntBASIC18.25■□□□□ 0.51
TraipQ8VIG6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TraipQ8VIG6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.25■□□□□ 0.51
TraipQ8VIG6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.25■□□□□ 0.51
TraipQ8VIG6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TraipQ8VIG6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TraipQ8VIG6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TraipQ8VIG6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TraipQ8VIG6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TraipQ8VIG6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TraipQ8VIG6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TraipQ8VIG6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TraipQ8VIG6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TraipQ8VIG6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TraipQ8VIG6 Gm11950-201ENSMUST00000121615 838 ntBASIC18.24■□□□□ 0.51
TraipQ8VIG6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TraipQ8VIG6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TraipQ8VIG6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.24■□□□□ 0.51
TraipQ8VIG6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TraipQ8VIG6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TraipQ8VIG6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TraipQ8VIG6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TraipQ8VIG6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TraipQ8VIG6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TraipQ8VIG6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TraipQ8VIG6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
TraipQ8VIG6 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TraipQ8VIG6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TraipQ8VIG6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TraipQ8VIG6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TraipQ8VIG6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TraipQ8VIG6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TraipQ8VIG6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TraipQ8VIG6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TraipQ8VIG6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TraipQ8VIG6 Ank2-226ENSMUST00000189368 339 ntBASIC18.23■□□□□ 0.51
TraipQ8VIG6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TraipQ8VIG6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TraipQ8VIG6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.23■□□□□ 0.51
TraipQ8VIG6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TraipQ8VIG6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TraipQ8VIG6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TraipQ8VIG6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TraipQ8VIG6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TraipQ8VIG6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TraipQ8VIG6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TraipQ8VIG6 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TraipQ8VIG6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TraipQ8VIG6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
TraipQ8VIG6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TraipQ8VIG6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TraipQ8VIG6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TraipQ8VIG6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TraipQ8VIG6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TraipQ8VIG6 Gm13186-201ENSMUST00000118031 316 ntBASIC18.22■□□□□ 0.51
TraipQ8VIG6 Gm7284-201ENSMUST00000131667 944 ntBASIC18.22■□□□□ 0.51
TraipQ8VIG6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TraipQ8VIG6 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TraipQ8VIG6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TraipQ8VIG6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TraipQ8VIG6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TraipQ8VIG6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TraipQ8VIG6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TraipQ8VIG6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TraipQ8VIG6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TraipQ8VIG6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TraipQ8VIG6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TraipQ8VIG6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TraipQ8VIG6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TraipQ8VIG6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TraipQ8VIG6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TraipQ8VIG6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TraipQ8VIG6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TraipQ8VIG6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TraipQ8VIG6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
TraipQ8VIG6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TraipQ8VIG6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TraipQ8VIG6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TraipQ8VIG6 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TraipQ8VIG6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TraipQ8VIG6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TraipQ8VIG6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.2■□□□□ 0.5
TraipQ8VIG6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TraipQ8VIG6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.2■□□□□ 0.5
TraipQ8VIG6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.2■□□□□ 0.5
TraipQ8VIG6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms