Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sgms1Q8VCQ6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sgms1Q8VCQ6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sgms1Q8VCQ6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sgms1Q8VCQ6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sgms1Q8VCQ6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sgms1Q8VCQ6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sgms1Q8VCQ6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sgms1Q8VCQ6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sgms1Q8VCQ6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Sgms1Q8VCQ6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.52■□□□□ 0.56
Sgms1Q8VCQ6 Gm38027-201ENSMUST00000192315 235 ntBASIC18.52■□□□□ 0.56
Sgms1Q8VCQ6 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.52■□□□□ 0.56
Sgms1Q8VCQ6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sgms1Q8VCQ6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sgms1Q8VCQ6 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sgms1Q8VCQ6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sgms1Q8VCQ6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sgms1Q8VCQ6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.52■□□□□ 0.55
Sgms1Q8VCQ6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sgms1Q8VCQ6 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sgms1Q8VCQ6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sgms1Q8VCQ6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sgms1Q8VCQ6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sgms1Q8VCQ6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sgms1Q8VCQ6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sgms1Q8VCQ6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sgms1Q8VCQ6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sgms1Q8VCQ6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sgms1Q8VCQ6 Mir1199-201ENSMUST00000117015 119 ntBASIC18.51■□□□□ 0.55
Sgms1Q8VCQ6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sgms1Q8VCQ6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.51■□□□□ 0.55
Sgms1Q8VCQ6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sgms1Q8VCQ6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.51■□□□□ 0.55
Sgms1Q8VCQ6 Gm9731-201ENSMUST00000209480 747 ntBASIC18.51■□□□□ 0.55
Sgms1Q8VCQ6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sgms1Q8VCQ6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sgms1Q8VCQ6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sgms1Q8VCQ6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sgms1Q8VCQ6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Sgms1Q8VCQ6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sgms1Q8VCQ6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sgms1Q8VCQ6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sgms1Q8VCQ6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sgms1Q8VCQ6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sgms1Q8VCQ6 Gm13216-201ENSMUST00000117145 591 ntBASIC18.5■□□□□ 0.55
Sgms1Q8VCQ6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sgms1Q8VCQ6 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.5■□□□□ 0.55
Sgms1Q8VCQ6 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sgms1Q8VCQ6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sgms1Q8VCQ6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.5■□□□□ 0.55
Sgms1Q8VCQ6 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Sgms1Q8VCQ6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sgms1Q8VCQ6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sgms1Q8VCQ6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sgms1Q8VCQ6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sgms1Q8VCQ6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Sgms1Q8VCQ6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sgms1Q8VCQ6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sgms1Q8VCQ6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.49■□□□□ 0.55
Sgms1Q8VCQ6 Gm12085-201ENSMUST00000119263 940 ntBASIC18.49■□□□□ 0.55
Sgms1Q8VCQ6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.49■□□□□ 0.55
Sgms1Q8VCQ6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sgms1Q8VCQ6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sgms1Q8VCQ6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sgms1Q8VCQ6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sgms1Q8VCQ6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sgms1Q8VCQ6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sgms1Q8VCQ6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Sgms1Q8VCQ6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Sgms1Q8VCQ6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sgms1Q8VCQ6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sgms1Q8VCQ6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sgms1Q8VCQ6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sgms1Q8VCQ6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sgms1Q8VCQ6 Gm7638-201ENSMUST00000121348 967 ntBASIC18.48■□□□□ 0.55
Sgms1Q8VCQ6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.48■□□□□ 0.55
Sgms1Q8VCQ6 Il3ra-202ENSMUST00000223589 738 ntBASIC18.48■□□□□ 0.55
Sgms1Q8VCQ6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Sgms1Q8VCQ6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sgms1Q8VCQ6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sgms1Q8VCQ6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sgms1Q8VCQ6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Sgms1Q8VCQ6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sgms1Q8VCQ6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sgms1Q8VCQ6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.47■□□□□ 0.55
Sgms1Q8VCQ6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sgms1Q8VCQ6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Sgms1Q8VCQ6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sgms1Q8VCQ6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.47■□□□□ 0.55
Sgms1Q8VCQ6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sgms1Q8VCQ6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sgms1Q8VCQ6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Sgms1Q8VCQ6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sgms1Q8VCQ6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sgms1Q8VCQ6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Sgms1Q8VCQ6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sgms1Q8VCQ6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sgms1Q8VCQ6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Sgms1Q8VCQ6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms