Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DNAAF3Q8N9W5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
DNAAF3Q8N9W5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.24■□□□□ 0.83
DNAAF3Q8N9W5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
DNAAF3Q8N9W5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 LSM12P1-201ENST00000411836 588 ntBASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 KRT16P6-202ENST00000425692 1426 ntBASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 AL031963.3-201ENST00000606441 850 ntBASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.23■□□□□ 0.83
DNAAF3Q8N9W5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 MIR663A-201ENST00000385250 93 ntBASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 AF201337.1-201ENST00000520239 748 ntBASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 C2orf69P4-201ENST00000565394 541 ntBASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 AC105036.2-201ENST00000569468 176 ntBASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 TMEM179-206ENST00000616017 1645 ntBASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 MKRN4P-201ENST00000444706 1521 ntBASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
DNAAF3Q8N9W5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DNAAF3Q8N9W5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
DNAAF3Q8N9W5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.21■□□□□ 0.83
DNAAF3Q8N9W5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DNAAF3Q8N9W5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DNAAF3Q8N9W5 HLA-G-202ENST00000376815 851 ntBASIC20.21■□□□□ 0.83
DNAAF3Q8N9W5 HLA-G-203ENST00000376818 1127 ntBASIC20.21■□□□□ 0.83
DNAAF3Q8N9W5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
DNAAF3Q8N9W5 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.21■□□□□ 0.83
DNAAF3Q8N9W5 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.21■□□□□ 0.83
DNAAF3Q8N9W5 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.21■□□□□ 0.83
DNAAF3Q8N9W5 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
DNAAF3Q8N9W5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DNAAF3Q8N9W5 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
DNAAF3Q8N9W5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.21■□□□□ 0.83
DNAAF3Q8N9W5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DNAAF3Q8N9W5 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DNAAF3Q8N9W5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.21■□□□□ 0.83
DNAAF3Q8N9W5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
DNAAF3Q8N9W5 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DNAAF3Q8N9W5 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 AL050303.2-201ENST00000619798 666 ntBASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DNAAF3Q8N9W5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms