Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Gm715-201ENSMUST00000117865 831 ntBASIC16.2■□□□□ 0.18
Clrn1Q8K445 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn1Q8K445 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Clrn1Q8K445 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn1Q8K445 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn1Q8K445 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn1Q8K445 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn1Q8K445 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn1Q8K445 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn1Q8K445 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn1Q8K445 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.19■□□□□ 0.18
Clrn1Q8K445 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.19■□□□□ 0.18
Clrn1Q8K445 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn1Q8K445 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn1Q8K445 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.19■□□□□ 0.18
Clrn1Q8K445 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.19■□□□□ 0.18
Clrn1Q8K445 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.19■□□□□ 0.18
Clrn1Q8K445 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn1Q8K445 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn1Q8K445 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn1Q8K445 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn1Q8K445 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn1Q8K445 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn1Q8K445 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn1Q8K445 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn1Q8K445 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn1Q8K445 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Clrn1Q8K445 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Clrn1Q8K445 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.18■□□□□ 0.18
Clrn1Q8K445 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Clrn1Q8K445 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Clrn1Q8K445 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Clrn1Q8K445 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn1Q8K445 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn1Q8K445 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
Clrn1Q8K445 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn1Q8K445 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn1Q8K445 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Clrn1Q8K445 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.18■□□□□ 0.18
Clrn1Q8K445 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn1Q8K445 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn1Q8K445 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn1Q8K445 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Clrn1Q8K445 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Clrn1Q8K445 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Clrn1Q8K445 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.18■□□□□ 0.18
Clrn1Q8K445 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn1Q8K445 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn1Q8K445 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Clrn1Q8K445 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn1Q8K445 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn1Q8K445 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn1Q8K445 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.17■□□□□ 0.18
Clrn1Q8K445 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn1Q8K445 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn1Q8K445 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn1Q8K445 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.17■□□□□ 0.18
Clrn1Q8K445 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.17■□□□□ 0.18
Clrn1Q8K445 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn1Q8K445 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn1Q8K445 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn1Q8K445 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn1Q8K445 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.17■□□□□ 0.18
Clrn1Q8K445 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
Clrn1Q8K445 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn1Q8K445 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn1Q8K445 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Clrn1Q8K445 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn1Q8K445 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn1Q8K445 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn1Q8K445 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn1Q8K445 Timm23-208ENSMUST00000226683 750 ntBASIC16.16■□□□□ 0.18
Clrn1Q8K445 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Clrn1Q8K445 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn1Q8K445 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn1Q8K445 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn1Q8K445 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Clrn1Q8K445 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms