Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.46■□□□□ 0.39
Rfx6Q8C7R7 Gm5408-201ENSMUST00000197998 747 ntBASIC17.46■□□□□ 0.39
Rfx6Q8C7R7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rfx6Q8C7R7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx6Q8C7R7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx6Q8C7R7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx6Q8C7R7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx6Q8C7R7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx6Q8C7R7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx6Q8C7R7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rfx6Q8C7R7 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx6Q8C7R7 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.46■□□□□ 0.39
Rfx6Q8C7R7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx6Q8C7R7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx6Q8C7R7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rfx6Q8C7R7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Rfx6Q8C7R7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.45■□□□□ 0.38
Rfx6Q8C7R7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx6Q8C7R7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx6Q8C7R7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx6Q8C7R7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx6Q8C7R7 Gm11643-201ENSMUST00000119578 864 ntBASIC17.45■□□□□ 0.38
Rfx6Q8C7R7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.45■□□□□ 0.38
Rfx6Q8C7R7 Mir6349-201ENSMUST00000184059 97 ntBASIC17.45■□□□□ 0.38
Rfx6Q8C7R7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx6Q8C7R7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx6Q8C7R7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx6Q8C7R7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx6Q8C7R7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx6Q8C7R7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx6Q8C7R7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 Gm10138-203ENSMUST00000206952 366 ntBASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 Gm4968-201ENSMUST00000071458 858 ntBASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx6Q8C7R7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx6Q8C7R7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx6Q8C7R7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx6Q8C7R7 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.43■□□□□ 0.38
Rfx6Q8C7R7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx6Q8C7R7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx6Q8C7R7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx6Q8C7R7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx6Q8C7R7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx6Q8C7R7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rfx6Q8C7R7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.43■□□□□ 0.38
Rfx6Q8C7R7 Gm2559-201ENSMUST00000201323 363 ntBASIC17.43■□□□□ 0.38
Rfx6Q8C7R7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx6Q8C7R7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rfx6Q8C7R7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx6Q8C7R7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Rfx6Q8C7R7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rfx6Q8C7R7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx6Q8C7R7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rfx6Q8C7R7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx6Q8C7R7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx6Q8C7R7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx6Q8C7R7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx6Q8C7R7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx6Q8C7R7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Rfx6Q8C7R7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx6Q8C7R7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx6Q8C7R7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx6Q8C7R7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.42■□□□□ 0.38
Rfx6Q8C7R7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx6Q8C7R7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.42■□□□□ 0.38
Rfx6Q8C7R7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rfx6Q8C7R7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx6Q8C7R7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx6Q8C7R7 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx6Q8C7R7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx6Q8C7R7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx6Q8C7R7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx6Q8C7R7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx6Q8C7R7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx6Q8C7R7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rfx6Q8C7R7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx6Q8C7R7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Rfx6Q8C7R7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx6Q8C7R7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx6Q8C7R7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx6Q8C7R7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms