Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nod1Q8BHB0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nod1Q8BHB0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nod1Q8BHB0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nod1Q8BHB0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Nod1Q8BHB0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nod1Q8BHB0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nod1Q8BHB0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.05■□□□□ 0.48
Nod1Q8BHB0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nod1Q8BHB0 Actl10-202ENSMUST00000226583 1501 ntBASIC18.05■□□□□ 0.48
Nod1Q8BHB0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nod1Q8BHB0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nod1Q8BHB0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nod1Q8BHB0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nod1Q8BHB0 Gm7461-201ENSMUST00000058918 827 ntBASIC18.05■□□□□ 0.48
Nod1Q8BHB0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nod1Q8BHB0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nod1Q8BHB0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.05■□□□□ 0.48
Nod1Q8BHB0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nod1Q8BHB0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nod1Q8BHB0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nod1Q8BHB0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nod1Q8BHB0 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.04■□□□□ 0.48
Nod1Q8BHB0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nod1Q8BHB0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nod1Q8BHB0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.04■□□□□ 0.48
Nod1Q8BHB0 Mir770-201ENSMUST00000103252 94 ntBASIC18.04■□□□□ 0.48
Nod1Q8BHB0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.04■□□□□ 0.48
Nod1Q8BHB0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nod1Q8BHB0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Nod1Q8BHB0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.04■□□□□ 0.48
Nod1Q8BHB0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nod1Q8BHB0 Grk6-206ENSMUST00000224995 2971 ntBASIC18.04■□□□□ 0.48
Nod1Q8BHB0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.04■□□□□ 0.48
Nod1Q8BHB0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nod1Q8BHB0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nod1Q8BHB0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nod1Q8BHB0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nod1Q8BHB0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nod1Q8BHB0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.04■□□□□ 0.48
Nod1Q8BHB0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.03■□□□□ 0.48
Nod1Q8BHB0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Gm37722-201ENSMUST00000193757 208 ntBASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nod1Q8BHB0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nod1Q8BHB0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nod1Q8BHB0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nod1Q8BHB0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nod1Q8BHB0 Mir3081-201ENSMUST00000175305 84 ntBASIC18.02■□□□□ 0.48
Nod1Q8BHB0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.02■□□□□ 0.48
Nod1Q8BHB0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nod1Q8BHB0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nod1Q8BHB0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Nod1Q8BHB0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nod1Q8BHB0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Nod1Q8BHB0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Nod1Q8BHB0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Nod1Q8BHB0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Nod1Q8BHB0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Nod1Q8BHB0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nod1Q8BHB0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Nod1Q8BHB0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Nod1Q8BHB0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nod1Q8BHB0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nod1Q8BHB0 Gm7153-201ENSMUST00000117092 455 ntBASIC18.01■□□□□ 0.47
Nod1Q8BHB0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.01■□□□□ 0.47
Nod1Q8BHB0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nod1Q8BHB0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nod1Q8BHB0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Nod1Q8BHB0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nod1Q8BHB0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nod1Q8BHB0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nod1Q8BHB0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nod1Q8BHB0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nod1Q8BHB0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nod1Q8BHB0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nod1Q8BHB0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms