Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1bQ8BH88 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1bQ8BH88 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1bQ8BH88 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Depdc1bQ8BH88 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Depdc1bQ8BH88 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1bQ8BH88 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1bQ8BH88 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.66■□□□□ 0.58
Depdc1bQ8BH88 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1bQ8BH88 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1bQ8BH88 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1bQ8BH88 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1bQ8BH88 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Depdc1bQ8BH88 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1bQ8BH88 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1bQ8BH88 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1bQ8BH88 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1bQ8BH88 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1bQ8BH88 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1bQ8BH88 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.66■□□□□ 0.58
Depdc1bQ8BH88 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Depdc1bQ8BH88 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1bQ8BH88 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.66■□□□□ 0.58
Depdc1bQ8BH88 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1bQ8BH88 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Depdc1bQ8BH88 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Depdc1bQ8BH88 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Depdc1bQ8BH88 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Depdc1bQ8BH88 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1bQ8BH88 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1bQ8BH88 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Depdc1bQ8BH88 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Depdc1bQ8BH88 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Depdc1bQ8BH88 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Depdc1bQ8BH88 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.64■□□□□ 0.57
Depdc1bQ8BH88 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1bQ8BH88 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1bQ8BH88 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1bQ8BH88 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1bQ8BH88 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1bQ8BH88 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Depdc1bQ8BH88 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1bQ8BH88 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1bQ8BH88 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Depdc1bQ8BH88 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.64■□□□□ 0.57
Depdc1bQ8BH88 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1bQ8BH88 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.64■□□□□ 0.57
Depdc1bQ8BH88 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Depdc1bQ8BH88 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Depdc1bQ8BH88 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1bQ8BH88 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1bQ8BH88 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1bQ8BH88 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1bQ8BH88 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1bQ8BH88 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1bQ8BH88 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1bQ8BH88 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.63■□□□□ 0.57
Depdc1bQ8BH88 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1bQ8BH88 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.63■□□□□ 0.57
Depdc1bQ8BH88 Gm37292-201ENSMUST00000192062 758 ntBASIC18.63■□□□□ 0.57
Depdc1bQ8BH88 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Depdc1bQ8BH88 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1bQ8BH88 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1bQ8BH88 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1bQ8BH88 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1bQ8BH88 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1bQ8BH88 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1bQ8BH88 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Depdc1bQ8BH88 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.63■□□□□ 0.57
Depdc1bQ8BH88 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.63■□□□□ 0.57
Depdc1bQ8BH88 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.63■□□□□ 0.57
Depdc1bQ8BH88 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms