Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Casc1Q6TDU8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Casc1Q6TDU8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.48■□□□□ 0.87
Casc1Q6TDU8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.48■□□□□ 0.87
Casc1Q6TDU8 Gm10138-203ENSMUST00000206952 366 ntBASIC20.48■□□□□ 0.87
Casc1Q6TDU8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.48■□□□□ 0.87
Casc1Q6TDU8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.48■□□□□ 0.87
Casc1Q6TDU8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.48■□□□□ 0.87
Casc1Q6TDU8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Casc1Q6TDU8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Casc1Q6TDU8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Casc1Q6TDU8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Casc1Q6TDU8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.48■□□□□ 0.87
Casc1Q6TDU8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Casc1Q6TDU8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Casc1Q6TDU8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Casc1Q6TDU8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Casc1Q6TDU8 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.47■□□□□ 0.87
Casc1Q6TDU8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Casc1Q6TDU8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Casc1Q6TDU8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Casc1Q6TDU8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Casc1Q6TDU8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Casc1Q6TDU8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Casc1Q6TDU8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Casc1Q6TDU8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Casc1Q6TDU8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Casc1Q6TDU8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Casc1Q6TDU8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Casc1Q6TDU8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Casc1Q6TDU8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.47■□□□□ 0.87
Casc1Q6TDU8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Casc1Q6TDU8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Casc1Q6TDU8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Casc1Q6TDU8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Casc1Q6TDU8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Casc1Q6TDU8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Casc1Q6TDU8 Gm15378-201ENSMUST00000121894 207 ntBASIC20.45■□□□□ 0.86
Casc1Q6TDU8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Casc1Q6TDU8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.45■□□□□ 0.86
Casc1Q6TDU8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Casc1Q6TDU8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Casc1Q6TDU8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Casc1Q6TDU8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Casc1Q6TDU8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Casc1Q6TDU8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC20.44■□□□□ 0.86
Casc1Q6TDU8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Casc1Q6TDU8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Casc1Q6TDU8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Casc1Q6TDU8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Casc1Q6TDU8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.44■□□□□ 0.86
Casc1Q6TDU8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.44■□□□□ 0.86
Casc1Q6TDU8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.44■□□□□ 0.86
Casc1Q6TDU8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Casc1Q6TDU8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Casc1Q6TDU8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Casc1Q6TDU8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Casc1Q6TDU8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Casc1Q6TDU8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Casc1Q6TDU8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Casc1Q6TDU8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.43■□□□□ 0.86
Casc1Q6TDU8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Casc1Q6TDU8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Casc1Q6TDU8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Casc1Q6TDU8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.43■□□□□ 0.86
Casc1Q6TDU8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Casc1Q6TDU8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.43■□□□□ 0.86
Casc1Q6TDU8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Casc1Q6TDU8 Gm15375-201ENSMUST00000119510 849 ntBASIC20.43■□□□□ 0.86
Casc1Q6TDU8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Casc1Q6TDU8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Casc1Q6TDU8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Casc1Q6TDU8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Casc1Q6TDU8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Casc1Q6TDU8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Casc1Q6TDU8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms