Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.64□□□□□ -0.39
Trav7d-3Q5R1I1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-3Q5R1I1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-3Q5R1I1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav7d-3Q5R1I1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav7d-3Q5R1I1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Gm10138-203ENSMUST00000206952 366 ntBASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav7d-3Q5R1I1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Gm37179-201ENSMUST00000194862 823 ntBASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav7d-3Q5R1I1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-3Q5R1I1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-3Q5R1I1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-3Q5R1I1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-3Q5R1I1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-3Q5R1I1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-3Q5R1I1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-3Q5R1I1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav7d-3Q5R1I1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-3Q5R1I1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav7d-3Q5R1I1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-3Q5R1I1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-3Q5R1I1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav7d-3Q5R1I1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-3Q5R1I1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-3Q5R1I1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav7d-3Q5R1I1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-3Q5R1I1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-3Q5R1I1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav7d-3Q5R1I1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav7d-3Q5R1I1 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms