Protein–RNA interactions for Protein: Q12441

TY1A-DR3, Transposon Ty1-DR3 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-DR3Q12441 FMP27YLR454W 7887 nt0.36□□□□□ -2.35
TY1A-DR3Q12441 tA(UGC)QtA(UGC)Q 76 nt0.28□□□□□ -2.36
TY1A-DR3Q12441 snR161snR161 161 nt0.26□□□□□ -2.37
TY1A-DR3Q12441 YJL113WYJL113W 4647 nt0.22□□□□□ -2.37
TY1A-DR3Q12441 RPL41BYDL133C-A 78 nt0.14□□□□□ -2.39
TY1A-DR3Q12441 YOR335W-AYOR335W-A 81 nt-0.02□□□□□ -2.41
TY1A-DR3Q12441 snR6snR6 112 nt-0.05□□□□□ -2.42
TY1A-DR3Q12441 tC(GCA)QtC(GCA)Q 76 nt-0.12□□□□□ -2.43
TY1A-DR3Q12441 snR58snR58 96 nt-0.23□□□□□ -2.45
TY1A-DR3Q12441 snR73snR73 106 nt-0.23□□□□□ -2.45
TY1A-DR3Q12441 CDC65tQ(CUG)M 72 nt-0.24□□□□□ -2.45
TY1A-DR3Q12441 YMR315W-AYMR315W-A 108 nt-0.29□□□□□ -2.46
TY1A-DR3Q12441 URB1YKL014C 5295 nt-0.42□□□□□ -2.48
TY1A-DR3Q12441 YHL009W-BYHL009W-B 5409 nt-0.42□□□□□ -2.48
TY1A-DR3Q12441 snR33snR33 183 nt-0.47□□□□□ -2.48
TY1A-DR3Q12441 tT(UGU)G1tT(UGU)G1 72 nt-0.5□□□□□ -2.49
TY1A-DR3Q12441 tT(UGU)G2tT(UGU)G2 72 nt-0.5□□□□□ -2.49
TY1A-DR3Q12441 tT(UGU)PtT(UGU)P 72 nt-0.5□□□□□ -2.49
TY1A-DR3Q12441 tP(UGG)QtP(UGG)Q 72 nt-0.61□□□□□ -2.51
TY1A-DR3Q12441 YOR309CYOR309C 381 nt-0.67□□□□□ -2.52
TY1A-DR3Q12441 YNR077CYNR077C 255 nt-0.69□□□□□ -2.52
TY1A-DR3Q12441 YBR223W-AYBR223W-A 120 nt-0.74□□□□□ -2.53
TY1A-DR3Q12441 snR87snR87 109 nt-0.9□□□□□ -2.55
TY1A-DR3Q12441 tY(GUA)QtY(GUA)Q 84 nt-0.9□□□□□ -2.55
TY1A-DR3Q12441 YBR126W-BYBR126W-B 144 nt-1.26□□□□□ -2.61
TY1A-DR3Q12441 YOL166W-AYOL166W-A 156 nt-1.68□□□□□ -2.68
TY1A-DR3Q12441 YDR543CYDR543C 300 nt-1.69□□□□□ -2.68
TY1A-DR3Q12441 YJR162CYJR162C 351 nt-2.28□□□□□ -2.77
TY1A-DR3Q12441 YJL136W-AYJL136W-A 84 nt-2.46□□□□□ -2.8
Retrieved 29 of 7,029 protein–RNA pairs in 6.2 ms