Protein–RNA interactions for Protein: Q08417

RSB1, Sphingoid long-chain base transporter RSB1, yeastyeast

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSB1Q08417 SBH2YER019C-A 267 nt0.11□□□□□ -2.39
RSB1Q08417 YJL113WYJL113W 4647 nt0.08□□□□□ -2.4
RSB1Q08417 snR161snR161 161 nt-0.11□□□□□ -2.43
RSB1Q08417 YHL009W-BYHL009W-B 5409 nt-0.2□□□□□ -2.44
RSB1Q08417 snR40snR40 97 nt-0.22□□□□□ -2.44
RSB1Q08417 snR6snR6 112 nt-0.4□□□□□ -2.47
RSB1Q08417 CDC65tQ(CUG)M 72 nt-0.44□□□□□ -2.48
RSB1Q08417 YOR335W-AYOR335W-A 81 nt-0.45□□□□□ -2.48
RSB1Q08417 URB1YKL014C 5295 nt-0.51□□□□□ -2.49
RSB1Q08417 RPL41BYDL133C-A 78 nt-0.56□□□□□ -2.5
RSB1Q08417 snR73snR73 106 nt-0.63□□□□□ -2.51
RSB1Q08417 YMR315W-AYMR315W-A 108 nt-0.64□□□□□ -2.51
RSB1Q08417 snR33snR33 183 nt-0.65□□□□□ -2.51
RSB1Q08417 tP(UGG)QtP(UGG)Q 72 nt-0.75□□□□□ -2.53
RSB1Q08417 tT(UGU)G1tT(UGU)G1 72 nt-0.86□□□□□ -2.55
RSB1Q08417 tT(UGU)G2tT(UGU)G2 72 nt-0.86□□□□□ -2.55
RSB1Q08417 tT(UGU)PtT(UGU)P 72 nt-0.86□□□□□ -2.55
RSB1Q08417 YOR309CYOR309C 381 nt-0.91□□□□□ -2.56
RSB1Q08417 tC(GCA)QtC(GCA)Q 76 nt-0.94□□□□□ -2.56
RSB1Q08417 snR58snR58 96 nt-0.98□□□□□ -2.57
RSB1Q08417 YNR077CYNR077C 255 nt-0.98□□□□□ -2.57
RSB1Q08417 YBR223W-AYBR223W-A 120 nt-1.18□□□□□ -2.6
RSB1Q08417 tY(GUA)QtY(GUA)Q 84 nt-1.24□□□□□ -2.61
RSB1Q08417 snR87snR87 109 nt-1.35□□□□□ -2.63
RSB1Q08417 YBR126W-BYBR126W-B 144 nt-1.99□□□□□ -2.73
RSB1Q08417 YOL166W-AYOL166W-A 156 nt-2.71□□□□□ -2.84
RSB1Q08417 YDR543CYDR543C 300 nt-2.76□□□□□ -2.85
RSB1Q08417 YJL136W-AYJL136W-A 84 nt-3.2□□□□□ -2.92
RSB1Q08417 YJR162CYJR162C 351 nt-3.75□□□□□ -3.01
Retrieved 29 of 7,029 protein–RNA pairs in 6.3 ms