Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 YOL013W-AYOL013W-A 192 nt0.33□□□□□ -2.36
PUF3Q07807 tA(UGC)QtA(UGC)Q 76 nt0.26□□□□□ -2.37
PUF3Q07807 snR161snR161 161 nt0.21□□□□□ -2.38
PUF3Q07807 YJL113WYJL113W 4647 nt0.2□□□□□ -2.38
PUF3Q07807 RPL41BYDL133C-A 78 nt0.06□□□□□ -2.4
PUF3Q07807 YOR335W-AYOR335W-A 81 nt0.06□□□□□ -2.4
PUF3Q07807 snR6snR6 112 nt0.03□□□□□ -2.4
PUF3Q07807 tC(GCA)QtC(GCA)Q 76 nt-0.12□□□□□ -2.43
PUF3Q07807 snR73snR73 106 nt-0.14□□□□□ -2.43
PUF3Q07807 CDC65tQ(CUG)M 72 nt-0.17□□□□□ -2.44
PUF3Q07807 YMR315W-AYMR315W-A 108 nt-0.24□□□□□ -2.45
PUF3Q07807 snR58snR58 96 nt-0.26□□□□□ -2.45
PUF3Q07807 URB1YKL014C 5295 nt-0.29□□□□□ -2.46 RIP-Chip
PUF3Q07807 YHL009W-BYHL009W-B 5409 nt-0.43□□□□□ -2.48
PUF3Q07807 snR33snR33 183 nt-0.44□□□□□ -2.48
PUF3Q07807 tP(UGG)QtP(UGG)Q 72 nt-0.5□□□□□ -2.49
PUF3Q07807 YOR309CYOR309C 381 nt-0.52□□□□□ -2.49
PUF3Q07807 tT(UGU)G1tT(UGU)G1 72 nt-0.54□□□□□ -2.5
PUF3Q07807 tT(UGU)G2tT(UGU)G2 72 nt-0.54□□□□□ -2.5
PUF3Q07807 tT(UGU)PtT(UGU)P 72 nt-0.54□□□□□ -2.5
PUF3Q07807 snR87snR87 109 nt-0.73□□□□□ -2.53
PUF3Q07807 YNR077CYNR077C 255 nt-0.73□□□□□ -2.53
PUF3Q07807 YBR223W-AYBR223W-A 120 nt-0.73□□□□□ -2.53
PUF3Q07807 tY(GUA)QtY(GUA)Q 84 nt-0.86□□□□□ -2.55
PUF3Q07807 YBR126W-BYBR126W-B 144 nt-1.44□□□□□ -2.64
PUF3Q07807 YDR543CYDR543C 300 nt-1.7□□□□□ -2.68
PUF3Q07807 YOL166W-AYOL166W-A 156 nt-1.76□□□□□ -2.69
PUF3Q07807 YJL136W-AYJL136W-A 84 nt-2.18□□□□□ -2.76
PUF3Q07807 YJR162CYJR162C 351 nt-2.51□□□□□ -2.81
Retrieved 29 of 7,029 protein–RNA pairs in 6.8 ms