Protein–RNA interactions for Protein: Q06688

BER1, SRR1-like protein BER1, yeastyeast

Known RBP Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BER1Q06688 snR62snR62 100 nt-2.67□□□□□ -2.84
BER1Q06688 YLR294CYLR294C 330 nt-2.74□□□□□ -2.85
BER1Q06688 snR85snR85 171 nt-2.75□□□□□ -2.85
BER1Q06688 YDR543CYDR543C 300 nt-2.75□□□□□ -2.85
BER1Q06688 YNL170WYNL170W 396 nt-2.76□□□□□ -2.85
BER1Q06688 YOR225WYOR225W 330 nt-2.8□□□□□ -2.86
BER1Q06688 YDL159W-AYDL159W-A 132 nt-2.82□□□□□ -2.86
BER1Q06688 YGR122C-AYGR122C-A 129 nt-2.82□□□□□ -2.86
BER1Q06688 snR64snR64 101 nt-2.9□□□□□ -2.87
BER1Q06688 ATP8Q0080 147 nt-3.08□□□□□ -2.9
BER1Q06688 YOL166W-AYOL166W-A 156 nt-3.19□□□□□ -2.92
BER1Q06688 YKL096C-BYKL096C-B 150 nt-3.31□□□□□ -2.94
BER1Q06688 Q0143Q0143 153 nt-3.32□□□□□ -2.94
BER1Q06688 YMR326CYMR326C 309 nt-3.32□□□□□ -2.94
BER1Q06688 YDR524C-AYDR524C-A 120 nt-3.35□□□□□ -2.95
BER1Q06688 YHR217CYHR217C 462 nt-3.36□□□□□ -2.95
BER1Q06688 YLL066W-BYLL066W-B 171 nt-3.41□□□□□ -2.96
BER1Q06688 snR53snR53 91 nt-3.47□□□□□ -2.96
BER1Q06688 snR87snR87 109 nt-3.59□□□□□ -2.98
BER1Q06688 Q0092Q0092 141 nt-3.59□□□□□ -2.98
BER1Q06688 YLR149C-AYLR149C-A 87 nt-3.62□□□□□ -2.99
BER1Q06688 snR58snR58 96 nt-3.63□□□□□ -2.99
BER1Q06688 YBL109WYBL109W 336 nt-3.77□□□□□ -3.01
BER1Q06688 YJR162CYJR162C 351 nt-3.83□□□□□ -3.02
BER1Q06688 snR40snR40 97 nt-3.9□□□□□ -3.03
BER1Q06688 YDL247W-AYDL247W-A 75 nt-4.07□□□□□ -3.06
BER1Q06688 tC(GCA)QtC(GCA)Q 76 nt-4.09□□□□□ -3.06
BER1Q06688 snR75snR75 89 nt-5.13□□□□□ -3.23
BER1Q06688 YJL136W-AYJL136W-A 84 nt-5.14□□□□□ -3.23
Retrieved 29 of 7,029 protein–RNA pairs in 5.4 ms