Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 YOL014WYOL014W 375 nt0.2□□□□□ -2.38
TY1A-MR1Q04215 snR58snR58 96 nt0.19□□□□□ -2.38
TY1A-MR1Q04215 tF(GAA)BtF(GAA)B 73 nt0.14□□□□□ -2.39
TY1A-MR1Q04215 tF(GAA)FtF(GAA)F 73 nt0.14□□□□□ -2.39
TY1A-MR1Q04215 tF(GAA)GtF(GAA)G 73 nt0.14□□□□□ -2.39
TY1A-MR1Q04215 tF(GAA)H1tF(GAA)H1 73 nt0.14□□□□□ -2.39
TY1A-MR1Q04215 tF(GAA)H2tF(GAA)H2 73 nt0.14□□□□□ -2.39
TY1A-MR1Q04215 tF(GAA)MtF(GAA)M 73 nt0.14□□□□□ -2.39
TY1A-MR1Q04215 tF(GAA)P1tF(GAA)P1 73 nt0.14□□□□□ -2.39
TY1A-MR1Q04215 tF(GAA)P2tF(GAA)P2 73 nt0.14□□□□□ -2.39
TY1A-MR1Q04215 CDC65tQ(CUG)M 72 nt0.02□□□□□ -2.41
TY1A-MR1Q04215 YMR315W-AYMR315W-A 108 nt-0.03□□□□□ -2.41
TY1A-MR1Q04215 URB1YKL014C 5295 nt-0.08□□□□□ -2.42
TY1A-MR1Q04215 YOR309CYOR309C 381 nt-0.31□□□□□ -2.46
TY1A-MR1Q04215 YHL009W-BYHL009W-B 5409 nt-0.36□□□□□ -2.47
TY1A-MR1Q04215 snR87snR87 109 nt-0.37□□□□□ -2.47
TY1A-MR1Q04215 tP(UGG)QtP(UGG)Q 72 nt-0.39□□□□□ -2.47
TY1A-MR1Q04215 snR33snR33 183 nt-0.45□□□□□ -2.48
TY1A-MR1Q04215 tT(UGU)G1tT(UGU)G1 72 nt-0.52□□□□□ -2.49
TY1A-MR1Q04215 tT(UGU)G2tT(UGU)G2 72 nt-0.52□□□□□ -2.49
TY1A-MR1Q04215 tT(UGU)PtT(UGU)P 72 nt-0.52□□□□□ -2.49
TY1A-MR1Q04215 YBR223W-AYBR223W-A 120 nt-0.74□□□□□ -2.53
TY1A-MR1Q04215 tY(GUA)QtY(GUA)Q 84 nt-0.88□□□□□ -2.55
TY1A-MR1Q04215 YNR077CYNR077C 255 nt-0.92□□□□□ -2.56
TY1A-MR1Q04215 YBR126W-BYBR126W-B 144 nt-1.4□□□□□ -2.63
TY1A-MR1Q04215 YDR543CYDR543C 300 nt-1.67□□□□□ -2.68
TY1A-MR1Q04215 YOL166W-AYOL166W-A 156 nt-1.89□□□□□ -2.71
TY1A-MR1Q04215 YJL136W-AYJL136W-A 84 nt-2.04□□□□□ -2.74
TY1A-MR1Q04215 YJR162CYJR162C 351 nt-2.37□□□□□ -2.79
Retrieved 29 of 7,029 protein–RNA pairs in 23.7 ms