Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vamp3P63024 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vamp3P63024 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vamp3P63024 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vamp3P63024 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Vamp3P63024 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vamp3P63024 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Vamp3P63024 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vamp3P63024 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC13.26□□□□□ -0.29
Vamp3P63024 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vamp3P63024 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vamp3P63024 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.26□□□□□ -0.29
Vamp3P63024 Gm43530-201ENSMUST00000195920 274 ntBASIC13.26□□□□□ -0.29
Vamp3P63024 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vamp3P63024 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC13.26□□□□□ -0.29
Vamp3P63024 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vamp3P63024 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vamp3P63024 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vamp3P63024 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vamp3P63024 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vamp3P63024 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vamp3P63024 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Vamp3P63024 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vamp3P63024 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vamp3P63024 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vamp3P63024 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Vamp3P63024 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vamp3P63024 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.25□□□□□ -0.29
Vamp3P63024 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vamp3P63024 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Vamp3P63024 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vamp3P63024 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vamp3P63024 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vamp3P63024 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vamp3P63024 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vamp3P63024 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vamp3P63024 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vamp3P63024 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vamp3P63024 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Vamp3P63024 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vamp3P63024 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vamp3P63024 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vamp3P63024 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vamp3P63024 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vamp3P63024 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vamp3P63024 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vamp3P63024 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vamp3P63024 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vamp3P63024 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vamp3P63024 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vamp3P63024 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vamp3P63024 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vamp3P63024 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vamp3P63024 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Vamp3P63024 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC13.24□□□□□ -0.29
Vamp3P63024 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vamp3P63024 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vamp3P63024 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vamp3P63024 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vamp3P63024 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vamp3P63024 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC13.24□□□□□ -0.29
Vamp3P63024 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vamp3P63024 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vamp3P63024 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Vamp3P63024 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vamp3P63024 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vamp3P63024 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.24□□□□□ -0.29
Vamp3P63024 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Vamp3P63024 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vamp3P63024 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.24□□□□□ -0.29
Vamp3P63024 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vamp3P63024 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vamp3P63024 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.24□□□□□ -0.29
Vamp3P63024 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.24□□□□□ -0.29
Vamp3P63024 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Vamp3P63024 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vamp3P63024 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vamp3P63024 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vamp3P63024 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Vamp3P63024 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vamp3P63024 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Vamp3P63024 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vamp3P63024 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vamp3P63024 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vamp3P63024 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vamp3P63024 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vamp3P63024 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vamp3P63024 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vamp3P63024 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vamp3P63024 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vamp3P63024 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vamp3P63024 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Vamp3P63024 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vamp3P63024 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vamp3P63024 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vamp3P63024 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vamp3P63024 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vamp3P63024 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vamp3P63024 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vamp3P63024 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms